Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1397 ATGGCTCTCAAACAGTGGGTGCTGTATGAGCAAATGAAACTAGAAATGTTATTTTCAACGTATTATCTATCTCTTTTCTTCTTTATCATCATTAGCTTTCTCTACTTGTTTAAACTCAGATCCAAAACCACTCTGAATTTGCCTCCATCACCACCAAAACTACCATTCATAGGCAATCTTCATCAGTTAGGCACACTGCCACACCGGTCTCTTCGAGAGCTATCGGTAAAATATGGTGACATCATGTTGCTGCAGTTGGGGCAGATGCAGAATCCAACTTTGGTGGTTTCATCCGTAGATGTGGCCATGGAAATCATGAAAACGCATGACATGGCCTTTTCAAATCGACACCAAAACACTGCTGTAAAAGTCTTACTCTATGGAGGCACTAACATTGCATTTGGACCCTATGGGGATGACTGGAAACACAAAAGAAAAATATGTGTCCTTGAACTCCTCAGCACCAAAATGGTTCAATCATTTCAACGAATCAGAGAAGAAGAAGTTGCCATATTGGTGAATAAGCTACGCGAAGTGAGCTCCAGTAGTGGTGATGATGATGAGTGCTACGTGAATCTAAGCGAGATGCTGATGTCAACGTCCACTGACGTCAAATATAAGGCCACTGCTCGTGCATTGGATGCTTTATTTGATCAAACAATTGCTGAGCATCTGACAGAGAAGATGAAAGGGGGGGAACACTCCAAAAAGAAAGACTTTGTGGATATCATACTCGAACTTCAAGAGAATAACATACTTAACTTTGAGCTCACAAAAAATGACCTCAAAACACTTGTACTGGATATGTTCGTTGGAGGAACTGATACAAGTGGAGTAACATTAGAATGGATTTTTACAGAGCTTGTAAGAAACCCAACCATAATGAAGAAAGTACAGGAAGAAGTGAGAAAAGTCGTAGGACATAAATCAAATGTAGAAGAAAATGACACCAATCAAATGCATTACATGAAGTGCGTAATCAAGGAAACTCTAAGGTTACACTCACCTGCTCCTCTTTTGGCTCCACGGAAAACAATGTCTAGTGTTAAATTGAAAGGATACGATATTCCTGCTAATACTTTGGTATATATCAATGCATGGGCAATGCAAAGAGATCCTGCATTTTGGGAAAGTCCCGAACAGTTCCTGCCAGAGAGATTTGAGAATAGTCAAGTTGGTTTTAAAGGTCAGCATTTTCAATTTATTCCATTCGGCTTTGGGAGAAGAGGGTGCCCTGGAATAAATTTTGGACTTGCTTTTGTTGAGTATGCTCTTGCCAGCCTTCTTTATTGGTTCGATTGGAAGCTTCCTGAATCTGATACACTTAAACAAGACATAGATATGAGTGAGGTGTTTGGACTCGTTGTCTCAAGGAAAACACCACTTTATCTTAAGCCACTCACTTTTTCATCTTTATCTGATTAA 1425 0.3986 MALKQWVLYEQMKLEMLFSTYYLSLFFFIIISFLYLFKLRSKTTLNLPPSPPKLPFIGNLHQLGTLPHRSLRELSVKYGDIMLLQLGQMQNPTLVVSSVDVAMEIMKTHDMAFSNRHQNTAVKVLLYGGTNIAFGPYGDDWKHKRKICVLELLSTKMVQSFQRIREEEVAILVNKLREVSSSSGDDDECYVNLSEMLMSTSTDVKYKATARALDALFDQTIAEHLTEKMKGGEHSKKKDFVDIILELQENNILNFELTKNDLKTLVLDMFVGGTDTSGVTLEWIFTELVRNPTIMKKVQEEVRKVVGHKSNVEENDTNQMHYMKCVIKETLRLHSPAPLLAPRKTMSSVKLKGYDIPANTLVYINAWAMQRDPAFWESPEQFLPERFENSQVGFKGQHFQFIPFGFGRRGCPGINFGLAFVEYALASLLYWFDWKLPESDTLKQDIDMSEVFGLVVSRKTPLYLKPLTFSSLSD 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1397 474 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 204 - -
Aed6g1397 474 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 205 469 - -
Aed6g1397 474 Pfam Cytochrome P450 198 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 Pfam Cytochrome P450 48 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Aed6g1397 474 PANTHER CYTOCHROME P450 71B11-RELATED 12 204 - -
Aed6g1397 474 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 PANTHER CYTOCHROME P450 71B11-RELATED 205 469 - -
Aed6g1397 474 SUPERFAMILY Cytochrome P450 48 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1397 474 Gene3D Cytochrome P450 34 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1397 Aed-Chr6 18499871 18502708 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1397 48 469 Cytochrome P450 AT3G26320 41.263 6.09e-122 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1397 K20617 - gmx:100803384 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1397 6 18499871 18502708 Aed10g0875 10 7329673 7331414 PCT