Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1396 ATGGCTCTCAAGCAAATGATCTTCTCTACATTTTATCCATCTCTTTTCCTTTTCATCACCCTCTTGTACCTGTTTAAGCTCGCAATAAACAAAACCAGATCCAAAACCACTCTGAATAACTTGCCTCCATCACCACCAAAACTACCATTCATAGGAAATCTTCACCAGCTAGGCTCACTGCCACACCGGTCTCTTCGAGAGCTCTCACAAAAATATGGTGACATCATGTTGCTGCAGTTGGGGCAGACGCAGAATCCAACTGTGGTGGTTTCATCCGCAAATGCGGCCATGGAAATCATAAAAAATCATGACTTAGCCTTTTCGAACCGACCCCAGAACGCTGCTGCAAAAATCTTACTCTACGGAGGCATTGACGTTGCGTTCGGGCTCTATGGTGAAAGCTTTAGTCAGAAAAAGAAAATATGTGTCAATGAACTTCTGAGCCCGAAAATGGTTCAGTCGTTTCACCAAATCAGGGAAGAAGAAGTGGCCAAATTGTTGACTAAGCTACGTGAAGTGAGTTCCAGTAGTACTGAATACGTGAACATAAAGGAGTTGGTGATGTCTACATCAAACAACATCGTATGTGAATGTGCTCTCGGTCGGAAATACACTGGAGATGGTTACAGCAGGGTGAAAGAGTTAGCGAGAACTGTTATGGTTCATCTCACAGCTTTCACAGTGAGAGATTACTTCCCTTTGTTGGGTTGGGTTGATGTTCTCACCCGAAAAATTAACGAGTTCAACACCACTTTTCACGCATTGGATGCTCTATTTGATCAAGCAATTGCGGAGCATTTGACAGTAGAGACGGAAGGTGATGATGATGATGACTACTCCAAAAGGAAAGACTTTGTGGATATCCTTCTCCAACTTCAACAGAATAACTTTGAGCTCACCAAAAATGACATCAAAGCACTTCTAATGGATATGTTCGTTGGAGGAACTGACCCAGCTGCAGTAACATTAGAATGGACTATTACAGAGCTTATGAGAAACCCAACAATAATGAACAAAGTTCAGGAAGAGGTGAGAAAAGTTGTTGGGCATAAAACAAATATAGAAGAAAATGACATCACTCAAATGCATTACCTTCACTGTGTAGTCAAAGAAACTCTAAGGTTACATCCACCAGCTACTCTTTTGGCCCCACGAAAAACAATGTCTAGTGTTAAATTGAAAGGATACGACATCCCTGCAAAATCAATGGTATATATTAATGCATGGATAATTCATAGAGATCCTGCATTTTGGGAAAGTCCTGAAGAGTTCCTACCAGAGAGATTTGAAAACAGTGAAATTGATTTTAAAGGTCAACATTTTAAGTATATTCCATTTGGTTTTGGGAGAAGAAGATGCCCTGGAATGAATTTTGGAGTTACTTTTGTTGAGTATGTTCTTGCCAGCTTTCTTTATTGGTTCGATTGGGAGCTTCCTGAATCTCATACACAAGAGCAAGACATTGATATGAGTGAGCTATCTGGACTAACTCTTCCGAGAGCGAAATTTCTAATCTTTATCTATGTTGAGACATTGGAAAGAGTTTTATTAATACTACAGTGTAGGAACTAA 1572 0.4027 MALKQMIFSTFYPSLFLFITLLYLFKLAINKTRSKTTLNNLPPSPPKLPFIGNLHQLGSLPHRSLRELSQKYGDIMLLQLGQTQNPTVVVSSANAAMEIIKNHDLAFSNRPQNAAAKILLYGGIDVAFGLYGESFSQKKKICVNELLSPKMVQSFHQIREEEVAKLLTKLREVSSSSTEYVNIKELVMSTSNNIVCECALGRKYTGDGYSRVKELARTVMVHLTAFTVRDYFPLLGWVDVLTRKINEFNTTFHALDALFDQAIAEHLTVETEGDDDDDYSKRKDFVDILLQLQQNNFELTKNDIKALLMDMFVGGTDPAAVTLEWTITELMRNPTIMNKVQEEVRKVVGHKTNIEENDITQMHYLHCVVKETLRLHPPATLLAPRKTMSSVKLKGYDIPAKSMVYINAWIIHRDPAFWESPEEFLPERFENSEIDFKGQHFKYIPFGFGRRRCPGMNFGVTFVEYVLASFLYWFDWELPESHTQEQDIDMSELSGLTLPRAKFLIFIYVETLERVLLILQCRN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1396 523 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 502 - -
Aed6g1396 523 Gene3D Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 Pfam Cytochrome P450 42 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 PANTHER CYTOCHROME P450 71B11-RELATED 6 502 - -
Aed6g1396 523 SUPERFAMILY Cytochrome P450 42 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1396 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1396 Aed-Chr6 18486812 18489930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1396 42 507 Cytochrome P450 AT3G26330 44.726 6.34e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1396 K20617 - gmx:100803384 731.865