Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1395 ATGCTATGTATATGGAGTAGTACTCTAACACTGCCTGATACAGTTGAAAAAAGAATGGCTCTCAAACTAGTGTTCTCTTCTGCTATGTATCTATCTCTTTCTTTCATCATTAGTGTCCTCTTATTGTTTAAGTTCGCAGCAAGAAGGACCAAACCCAAAACCAACCTGAATCTTCCTCCATCACCACCAAAACTACCAATCATCGGCAACCTTCATCAGTTAGGAGCGCTGCCACATCGATCCCTTGGAGACCTCTCTCTCAAATACGGTGATATGATGATGTTGCAGTTGGGGCTGCGGCAGACACCAACTCTGGTGGTTTCATCTGCAGAAGTTGCCATGGAAATCATGAAGACTCATGACAAAGCTTTCTCGAACCGACCCCATAGCACTGCCGGAAAAATATTACTCTATGGATGCATAGACGTTGGATTTGGCCACTACGGAGAAAACTGGAGACAGAAGAAAAAAATATGCATCTTCCAACTTCTGAGCATGAAAATGGTGCAATCGTTTGGTCGCATCAGAGTAGAAGAAGCTGCAGAGTTGGTGAACAAGCTACGTGAAGAAGCAACATTAAGCTCCAGTACTAGTGATGCGTCTTACGTGAATCTAAGTGACATGCTTATGTCAACCTCGATAAATATCGTATATAAGTGCGTTTTCGGAAGGAAGTATATTAATTCAGGGAATAGTAACTGCAACTTGAAAGAATCAGTAATGAATGTTATGGCTCACATGACAGCTTTTACATTTAGCGATTACTTTCCTTTGTTGGGTTGGGTTGATGTTCTCACCGGAAAAATTGGTGCGTTCAAGGCCACTTCTGAAGCGTTCGATGCTGTGTTTGATCAAGTGATTGAAGAGCATTTGACTGCGAAGACGAAGACGCACTCAGAAAAGAAAGACTTCGTGGATATTCTCCTCCAACTTCAACAGGATAGCATGCTGAACTTTGAGCTCACCAAAAATGACGTCAAAGCACTTCTACTGGACATGTTTGTTGGAGCAACTGAAACAACTGCGGTAGCATTAATATGGGCTATTTCAGAGCTTGTGAGAAACCCAATCATAATGAAGAAAGCACAAGAAGAAGTGAGAAACGTTATAGAGCACAAATCAAATGTAGAAGAAAATGACATCAATCAAATGCATTACCTGAAGTGCGTAGTTAAAGAAACTCTAAGGTTACATCCACCTGCTACTCTTTTGGCTCCTCGAGAAACAATATCTAGTGTGAAACTGAATGGATATGACATTCCTGCAAAAACAATGGTATATATCAATGCATGGGCAATTCAAAGGGATCCAAAATATTGGAATAACCCTGAAGAGTTCCTACCAGAGAGGTTTGAAAGCAATCAAGTTGATTTTATAGGTAAAGACTTTCAGTTTATTCCATTTGGTTTTGGAAGAAGAGTATGTCCTGGAATCAATTTTGGACTTGCTTCTGTTGAATATGTGTTGGCGAACCTCCTCTGTTGGTTCGATTGGGAACTTCCTAAAACTGATATTGCACATAAACAAGATTTAGATATGAGTGAGACATTTGGGCTCGTCGTGGCAAAGAAAGTACCCCTTAATCTTAAACCAATGATATTTTCTTTTTAA 1611 0.4029 MLCIWSSTLTLPDTVEKRMALKLVFSSAMYLSLSFIISVLLLFKFAARRTKPKTNLNLPPSPPKLPIIGNLHQLGALPHRSLGDLSLKYGDMMMLQLGLRQTPTLVVSSAEVAMEIMKTHDKAFSNRPHSTAGKILLYGCIDVGFGHYGENWRQKKKICIFQLLSMKMVQSFGRIRVEEAAELVNKLREEATLSSSTSDASYVNLSDMLMSTSINIVYKCVFGRKYINSGNSNCNLKESVMNVMAHMTAFTFSDYFPLLGWVDVLTGKIGAFKATSEAFDAVFDQVIEEHLTAKTKTHSEKKDFVDILLQLQQDSMLNFELTKNDVKALLLDMFVGATETTAVALIWAISELVRNPIIMKKAQEEVRNVIEHKSNVEENDINQMHYLKCVVKETLRLHPPATLLAPRETISSVKLNGYDIPAKTMVYINAWAIQRDPKYWNNPEEFLPERFESNQVDFIGKDFQFIPFGFGRRVCPGINFGLASVEYVLANLLCWFDWELPKTDIAHKQDLDMSETFGLVVAKKVPLNLKPMIFSF 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1395 536 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Aed6g1395 536 Coils Coil 359 379 - -
Aed6g1395 536 PANTHER CYTOCHROME P450 71B11-RELATED 22 535 - -
Aed6g1395 536 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 Gene3D Cytochrome P450 44 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 22 535 - -
Aed6g1395 536 SUPERFAMILY Cytochrome P450 59 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1395 536 Pfam Cytochrome P450 59 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1395 Aed-Chr6 18476385 18478615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1395 54 527 Cytochrome P450 AT2G30770 44.118 1.48e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1395 K20617 - gmx:100781909 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1395 6 18476385 18478615 Aed6g1395 6 18476385 18478615 ECH