Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1393 ATGGCTCTGAAACAATGGCCTTACGAGCAAATGAAAGGAGTGTTCTCTTCAACCTTCTATCTCTCTCTTTCCTTTGTTATCAGTGTCATGTTATTGTTTAAGCTCGCAACAAGAACCAAACCCAAATCCAAATCCAAAACCGAAACCAATCTGAATCTGCCACCATCTCCACCAAAACTACCAATCATAGGTAATCTTCACCAGTTTGGAACACTGCCACATCGATCTCTTCGAGACCTCTCTCTCAAACATGGTGACATGATGATGTTGCAGTTGGGGCAGATGCAAACTCCAACCCTAGTTGTTTCATCCGTAGACGTGGCCACGGAAATATTCAAAACTCACGATCTAGCTTTTTCGAACCGACCCCAAAACACTGCTGCAAAAATCTTACTCTATGGATGCACAGACGTTGGCTTTGCAAACTACGGAGAAAATTGGAGACAGAAGAGAAAAATATTCGTCCTCGAACTTCTTAGCACGAAAAGGGTGCAATCATTTCGTGGCGTCAGAGAAGAAGAAGTTGCGGAGTTGGTGAATAAACTACGTGAGGCAAGCTCCAGTGATGCAAGTTACGTGAATCTGAGTGAGATGATTATGTCAACATCGAATAACATTGTGTGTAAATGTGCTCTTGGAAGGAACTTTACTACAAAAGATGGTTACAACAGTGTGAAAGAGTTGGCGAGGGATGCTATGATTCATCTCATGGCTTTCACTGTGAGAGATTACTTCCCTTGGTTGGGTTGGATTGATGTTCTCACTGGAAAAATTCAGAAATATAAGGCAACTTCTGCAGCAATGGATGCTTTGTTTGATAAGGTAATTGCAGAACATTTGCCTCAGAAAAAAAGGGAAAGTCAACACTCCAAAAGGAAAGACTTTGTGGACATCTTACTCCAACTTCAACAAGATAACATGCTGAGCTTTGACCTCACCAAAAATGACATTAAAGCACTCATGACGGACATGTTTTTGGGAGGTACTGATACAACTGCGGCGGCATTAGAATGGACTATGTCAGAGTTGGTAAGAAATCCAACCATAATGAAAAAAGTACAAGAAGAAGTAAGGACAGTTGTAGGTCATAAATCAAATGTGGAAGAGAACGATATTAGTCAAATGCACTATCTAAAATGTGTAGTCAAAGAAATTCTAAGGTTACATCCTCCTACTCCTCTTTTGGCCCCTAGAGTAACAATGTCTAGTGTAAAACTGAAAGGATATGATATTCCAGCAAAAACAATGGTATATATCAATGCATGGGCAATGCAAAGAGATCCTGCATTTTGGGAACGCCCTGAAGAGTTCTTGCCAGAGAGATTTGAAAATAGTCAAGTTGATTTTAAAAGTCAAGAATATTTTCAGTTTCTTCCATTTGGTTTTGGGAGAAGAGGATGTCCTGGAGTGAATTTTGGAATTGCTTTGATTGAGTATGAGCTTGCTAATCTTCTTTATTGGTTCGATTGGAAATTGCCTGAAACCGGTGCACCAGATATAGATATGAGTGAAATATTCGGACTTGTTGTCTCAAAGAAAGTACCACTTCTCCTTAAACCAAAAGCCTTTTCATTTTAA 1578 0.3986 MALKQWPYEQMKGVFSSTFYLSLSFVISVMLLFKLATRTKPKSKSKTETNLNLPPSPPKLPIIGNLHQFGTLPHRSLRDLSLKHGDMMMLQLGQMQTPTLVVSSVDVATEIFKTHDLAFSNRPQNTAAKILLYGCTDVGFANYGENWRQKRKIFVLELLSTKRVQSFRGVREEEVAELVNKLREASSSDASYVNLSEMIMSTSNNIVCKCALGRNFTTKDGYNSVKELARDAMIHLMAFTVRDYFPWLGWIDVLTGKIQKYKATSAAMDALFDKVIAEHLPQKKRESQHSKRKDFVDILLQLQQDNMLSFDLTKNDIKALMTDMFLGGTDTTAAALEWTMSELVRNPTIMKKVQEEVRTVVGHKSNVEENDISQMHYLKCVVKEILRLHPPTPLLAPRVTMSSVKLKGYDIPAKTMVYINAWAMQRDPAFWERPEEFLPERFENSQVDFKSQEYFQFLPFGFGRRGCPGVNFGIALIEYELANLLYWFDWKLPETGAPDIDMSEIFGLVVSKKVPLLLKPKAFSF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1393 525 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Aed6g1393 525 PANTHER CYTOCHROME P450 71B11-RELATED 13 524 - -
Aed6g1393 525 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 SUPERFAMILY Cytochrome P450 54 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 524 - -
Aed6g1393 525 Pfam Cytochrome P450 54 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1393 525 Gene3D Cytochrome P450 43 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1393 Aed-Chr6 18469010 18472109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1393 49 522 Cytochrome P450 AT2G30770 45.511 4.64e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1393 K20617 - gmx:100803922 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1393 6 18469010 18472109 Aed6g1393 6 18469010 18472109 ECH