Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1390 ATGATCTCTTTGATAGTGTTTGTTTTTCTTACACTATTGTTAACCTTGTCATTGATTAAACACTTGAGAAAGCCTAGTGCTGCAGAAAAGAAGCTACCACCTGGGCCATGGAAACTACCCTTCATTGGCAACCTTCACCAACTTGGCACGTTGCCGCATCGATCCCTTCAACATCTTTCAGATAAACATGGACCTCTCATGTTCTTGCAACTGGGTTCAATACCCACCTTGGTTGTTTCCTCTGCTGAGATGGGCAGAGAGATTTTCAAAAACCATGACTCGGTTTTCTCTGGCAGGCCTTCGTTGCACGCTTCAAACCGGTTAGGATACGGTTCAACCGTGAGTTTCGCACCGTACGGTGAGTACTGGAGGGAAATGAGGAAGATCATGATCGTGGAGCTGTTGAGTCCGAAAAGGGTTCAATCGTTTGAAGCTGTGAGGTTTGAAGAAGTTAAACTTCTGCTTCAGAACATAGCTCTTTCTCATGATCCTGTCAACTTGAATGAACTAACCCTTTCGATGACCAACAACATTGTTTGTCGGATTGCCCTCGGGAAAAGAAGCGGCGTAGATGACGCAAATAGGCTTTCTGAAATGCTTAAGGAAACGCAAGCGATGTTGGGAGGGTTTTTTCCCGTTGATTTTTTTCCACGGTTGGGGTGGCTCAACAGGTTCAGTGGACTTGAAAGTAGGCTTGAGAAGAATTTCAGAGAAATGGATAGCTTTTATGACCAAGTTATCAAGGAGCATATAATTAATGACTCTTCTGAGAGATCAAGAACAGAGAATGAAGACGTTGTTGATGTGCTACTTCAAGTTCAGAAGGATCCAAATCAAGCAATTGCTATCACCGTTAACCAAATCAAAGGTGTTCTAGTGGACATATTTGTAGCGGGAACTGACACTGCTTCAGCCACAATGGTATGGGCAATGTCTGAGCTGATTAGGAATCCAAAAGCAATGAAAAGAGCCCAAGAAGAGATAAGAGGAGTTTTCAGGGGAAAAGAGATGGTAGAAGAAATCGACCTTTCGAGACTCTTGTATTTCAAAACAGTTGTGAAAGAGGCATTGAGACTCCATCCACCAGCGCCATTACTAGTGCCAAGAGAGACCACAGAGAGTTGCACAATCAAAGGGTTTGAAATCCCAGCCAAAACAAGGGTATTGGTCAATGCAAAATCAATATCAATGGATCCAACTTGTTGGGAGAGTCCAAATGTGTTCTTACCAGAGAGGTTCTTGGATAGTCCAATCGACTTTAAAGGACAACACTTTGAGATGTTGCCATTTGGGGTAGGTCGAAGAGGTTGCCCTGGTGTGAACTTTGCCGTGCCACTTGTTGAGTTAGCACTTGCAAATCTTTTGCTTCGTTTTGATTGGGAACTGCCTCTTGGACTTGGAATAGAAGACTTGGATATGGAAGAAGCTATTGGCATTACCACACACAAAAAAACTCATCTTTGGCTTAAAGCAACTCCCTTTCGCGAGGAGTAG 1494 0.4351 MISLIVFVFLTLLLTLSLIKHLRKPSAAEKKLPPGPWKLPFIGNLHQLGTLPHRSLQHLSDKHGPLMFLQLGSIPTLVVSSAEMGREIFKNHDSVFSGRPSLHASNRLGYGSTVSFAPYGEYWREMRKIMIVELLSPKRVQSFEAVRFEEVKLLLQNIALSHDPVNLNELTLSMTNNIVCRIALGKRSGVDDANRLSEMLKETQAMLGGFFPVDFFPRLGWLNRFSGLESRLEKNFREMDSFYDQVIKEHIINDSSERSRTENEDVVDVLLQVQKDPNQAIAITVNQIKGVLVDIFVAGTDTASATMVWAMSELIRNPKAMKRAQEEIRGVFRGKEMVEEIDLSRLLYFKTVVKEALRLHPPAPLLVPRETTESCTIKGFEIPAKTRVLVNAKSISMDPTCWESPNVFLPERFLDSPIDFKGQHFEMLPFGVGRRGCPGVNFAVPLVELALANLLLRFDWELPLGLGIEDLDMEEAIGITTHKKTHLWLKATPFREE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1390 497 PANTHER OS08G0105600 PROTEIN 1 495 - -
Aed6g1390 497 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PANTHER CYTOCHROME P450 71A9 1 495 - -
Aed6g1390 497 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Aed6g1390 497 Pfam Cytochrome P450 33 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 Gene3D Cytochrome P450 22 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1390 497 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1390 Aed-Chr6 18441526 18444310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1390 2 489 Cytochrome P450 AT3G26310 43.487 5.25e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1390 K20617 - gmx:100806157 822.387