Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1380 ATGGCCATTGACTACCACACCACTCGGGTCCTACCCGAACCCGATGTCTACATTCTCACTTCCAACAGAACACGCATTCCAGCCCACGCTGGCCTTCTCGCTTCTATGTCGCCGGTGTTGGAGAATTTGATAGATCGGCCACGTAAGCATCGGAGCTCCGAGAGAGTAATCCAAATCCAAGGCGTCCCCTGCGACGCCGTCACCTCCTTCGTCTCTTTCCTCTACTCTTCCAGGTGCACGGAGGAGGAGATGGACAAGTACGGGATGCACCTCCTCGCATTGTCGCACGTCTACATGGTGCCGCAGCTCAAGCAGAGATGCATCAAGGGTTTGACCAACCGCTTGACCATAGAGAACGTCGTCGACGTGCTGCAACTCGCGCGTCTCTGCGACGCGCCGGATCTTCACCTCCGCTGCATGAAGCTCCTCGCAAACAATTTCAAGGCGGTGGAAGCAACCGAGGGCTGGAAGTTCCTCGTCAAACACGACCCCTGGCTCGAACTCGATATTCTCCGCTTCATCGAAGAACACGAAACAAGGAAGAAGAAATCTCGGAGGTATAGGATGGAGCAGGGGCTGTACGCGGAGCTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCACGGAGGGGTGCACGCAAGTTGGACCGTATGATGCGAAGACGAAGACGGAGTGTGGCAGATTCGCCACGTGTCAGGGTCTACAGGCTCTGATCCGCCACTTTGTCACGTGCGACAAGAAGGTGCGCGGTGGCTGCGTGCGGTGCAAGCGAATGTGGCAGCTCTTTCGACTTCATTCCTATGTTTGCCACCAACCCGATTCCTGCAAGGTTCCTTTTTGCAGGCAATTTCAATTGAGAATGCAGCAAGAGAAAAGGAAAGATGATCCAAAATGGAAACTACTAGCGAAGAAGGTGGCCTCAGCCAAAGTCATGTCTTCATTGTCTCTGCCAAAGAGGAAGCGAGATGAAGAAATAAGAGTGACAATAAACAATCCCGGGATTAGAAGTTTTAAATTACTATGA 1026 0.5292 MAIDYHTTRVLPEPDVYILTSNRTRIPAHAGLLASMSPVLENLIDRPRKHRSSERVIQIQGVPCDAVTSFVSFLYSSRCTEEEMDKYGMHLLALSHVYMVPQLKQRCIKGLTNRLTIENVVDVLQLARLCDAPDLHLRCMKLLANNFKAVEATEGWKFLVKHDPWLELDILRFIEEHETRKKKSRRYRMEQGLYAELSEAMECLEHICTEGCTQVGPYDAKTKTECGRFATCQGLQALIRHFVTCDKKVRGGCVRCKRMWQLFRLHSYVCHQPDSCKVPFCRQFQLRMQQEKRKDDPKWKLLAKKVASAKVMSSLSLPKRKRDEEIRVTINNPGIRSFKLL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1380 341 Gene3D TAZ domain 189 310 IPR035898 -
Aed6g1380 341 Pfam BTB/POZ domain 14 113 IPR000210 GO:0005515
Aed6g1380 341 Pfam TAZ zinc finger 198 281 IPR000197 -
Aed6g1380 341 SMART BTB_4 14 115 IPR000210 GO:0005515
Aed6g1380 341 SMART TAZ_2 191 282 IPR000197 -
Aed6g1380 341 Gene3D - 116 188 - -
Aed6g1380 341 Gene3D Potassium Channel Kv1.1; Chain A 12 115 IPR011333 -
Aed6g1380 341 SUPERFAMILY POZ domain 15 114 IPR011333 -
Aed6g1380 341 SUPERFAMILY TAZ domain 190 290 IPR035898 -
Aed6g1380 341 ProSiteProfiles BTB domain profile. 14 83 IPR000210 GO:0005515
Aed6g1380 341 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 4 339 - -
Aed6g1380 341 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 4 339 IPR044513 -
Aed6g1380 341 CDD BACK 116 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1380 Aed-Chr6 18392436 18395548 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Aed6g1380 BTB 9.3e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1380 - - gmx:100807120 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1380 6 18392436 18395548 Aed6g1380 6 18392436 18395548 ECH
Aed6g1380 6 18392436 18395548 Aed10g0858 10 7189834 7192423 PCT