Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1377 ATGGCTTCGAGCGAGGGGTTTTTGACGGATGGGCAGAGGGAGCTGCTAAAAATTGCAAGCCAAAATGCGGAGAATCTGTCGTTGTCACCGAAGTCGCCGTCGTCCTTGCTTTCTGACCATCACGTGAAAGCCCCTGCTGGTGGTGGTAAGGCACCAACCGCTGGGGTAGCTGTGAGGCATGTGCGGCGGACACACTCGGGAAAGTATGGGAAGGTGAAGAAAGATGGTGCTGGTGGGAAGGGTACTTGGGGAAAATTGCTTGATACAGAGATTGATTCTCACATAGACCGGAATGATCCAAATTATGACAGTGGCGAGGAACCCTATCAGCTGGTTGGATCTACTGTTACTGACCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCATCATAGAGGAATATTTCAGTAATGGGGATGTGGATCTGGCAGCATCTGACCTCAGAGAACTTGGCTCAAGTGAATACTATCCTTACTTCATTAAGCGCCTTGTGTCCATGGCAATGGACAGGCACGATAAGGAGAAAGAAATGGCTTCTGTTCTGCTTTCAGCACTGTATGCTGATGTCATCAGTCCTGCACAGATTAAGGATGGTTTTTTCATGCTTCTTGAATCTGCTGACGATCTTGCTGTGGATATACTGGATGCAGTTGACATCCTTGCTTTATTCTCAGCACGAGCTGTTGTTGATGACATTCTTCCTCCAGCTTTTCTTGCAAGGGCTAGGAAGGCTCTTCCAGAATCTTCCAAGGGAGTTCAGGTAATCCATACTGCTGAAAAGAGTTATCTCTCAGCTCCACACCATGCAGAACTTGTGGAAAGGCGATGGGGTGGGAGCACTCACATAACTGTTGAGGAAGTGAAGAAGAAGATAGCTGATTTACTTAGAGAATATGTGGATAGTGGTGACACATTGGAAGCCTGTAGGTGTATACGTGAATTGGGGGTTTCATTCTTCCATCATGAGGTTGTTAAGAGGGCTCTGGTACTTGCCATGGAGATTCGTTCAGCAGAACCTCTAATGTTGAAGCTACTGAAAGAAGCAGCAGAAGAAGGACTTGTTAGTTCCAGCCAAATGGTGAAAGGGTTTTCTCGTTTGGCAGAATCCCTGGATGATCTTGCGCTTGATATTCCGTCAGCTAAAGCATTGTTCCAGTCATTTGTCCCCAAGGCAATTAATGAAGGATGGCTTGATGCTTCACTTACCAAACCTGCAACTGAAGATGGAGAAATCCAAGTTGAAGATGAGAAGGTGAAGAAGTACAAAAAGGAATCTGTAACTATAATTCATGAGTATTTTCTTTCTGACGACATTCCTGAACTGATTCGAAGCCTTGAAGATCTTGGAGCACCCGAGCATAACCCAATATTTTTGAAGAGGCTAATAACTCTTGCTATGGATCGCAAGAACAGAGAAAAGGAAATGGCATCTGTACTGCTATCTGCTCTTCATATAGAGATCTTCTCAACAGAGGATATAGTTAACGGTTTTGTCATGCTTCTGGAAAGTGCAGAAGATACAGCACTGGATATATTGGATGCTTCAAATGAGCTTGCTCTGTTCTTAGCTCGGGCTGTTATTGACGATGTATTGGTCCCACTGAATCTGGAAGAAATTGGCAGCAGGCTACCACCGAAATCCAGTGGTAGTGAAACCGTGCGCATGGCTCGGTCACTCACTGCTGCTCGTCATGCTGGTGAGAGGCTATTGAGATGCTGGGGTGGAGGGACTGGATGGGCTGTGGAGGATGCTAAGGACAAGATCATGAAGCTCTTGGAAGAGTACGAAAGTGGTGGGGATGTGAGCGAAGCTTGCCAATGTATCCGTGACCTGGGAATGCCTTTCTTCAACCATGAGGTAGTGAAGAAAGCTTTGATAATGGCAATGGAGAAGAAGAATGATAGGATGCTGGATCTAGTGCAGGAGTGCTTCAGTGAAGGCCTGATCACCATTAATCAGATGACTAAAGGTTTCACCCGAATAAAGGATGGTCTTGATGATCTGGCTCTGGACATCCCAAACGCAAAGGACAAGTTTGGCTTCTATGTGGAGCATGCTCAGTCCAAGGGTTGGCTTCTACCCTCATTTGATTCGTCTGCCACAGATGCTTTTTGA 2115 0.4605 MASSEGFLTDGQRELLKIASQNAENLSLSPKSPSSLLSDHHVKAPAGGGKAPTAGVAVRHVRRTHSGKYGKVKKDGAGGKGTWGKLLDTEIDSHIDRNDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSIIEEYFSNGDVDLAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIKDGFFMLLESADDLAVDILDAVDILALFSARAVVDDILPPAFLARARKALPESSKGVQVIHTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVDSGDTLEACRCIRELGVSFFHHEVVKRALVLAMEIRSAEPLMLKLLKEAAEEGLVSSSQMVKGFSRLAESLDDLALDIPSAKALFQSFVPKAINEGWLDASLTKPATEDGEIQVEDEKVKKYKKESVTIIHEYFLSDDIPELIRSLEDLGAPEHNPIFLKRLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLVPLNLEEIGSRLPPKSSGSETVRMARSLTAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGDVSEACQCIRDLGMPFFNHEVVKKALIMAMEKKNDRMLDLVQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKDKFGFYVEHAQSKGWLLPSFDSSATDAF 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1377 704 SUPERFAMILY ARM repeat 120 280 IPR016024 -
Aed6g1377 704 SUPERFAMILY ARM repeat 418 576 IPR016024 -
Aed6g1377 704 Gene3D - 273 406 - -
Aed6g1377 704 Gene3D - 571 700 - -
Aed6g1377 704 Pfam MA3 domain 585 692 IPR003891 -
Aed6g1377 704 Pfam MA3 domain 123 234 IPR003891 -
Aed6g1377 704 Pfam MA3 domain 422 531 IPR003891 -
Aed6g1377 704 Pfam MA3 domain 287 398 IPR003891 -
Aed6g1377 704 ProSiteProfiles MI domain profile. 122 243 IPR003891 -
Aed6g1377 704 MobiDBLite consensus disorder prediction 25 55 - -
Aed6g1377 704 PANTHER PROGRAMMED CELL DEATH PROTEIN 4-LIKE 1 695 - -
Aed6g1377 704 SUPERFAMILY ARM repeat 580 698 IPR016024 -
Aed6g1377 704 SUPERFAMILY ARM repeat 283 404 IPR016024 -
Aed6g1377 704 Gene3D - 115 263 - -
Aed6g1377 704 Gene3D - 410 563 - -
Aed6g1377 704 ProSiteProfiles MI domain profile. 583 702 IPR003891 -
Aed6g1377 704 PANTHER PROGRAMMED CELL DEATH 4 1 695 IPR039778 GO:0045892
Aed6g1377 704 SMART ma3_7 584 693 IPR003891 -
Aed6g1377 704 SMART ma3_7 287 398 IPR003891 -
Aed6g1377 704 SMART ma3_7 421 532 IPR003891 -
Aed6g1377 704 SMART ma3_7 123 234 IPR003891 -
Aed6g1377 704 ProSiteProfiles MI domain profile. 420 541 IPR003891 -
Aed6g1377 704 ProSiteProfiles MI domain profile. 286 407 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1377 Aed-Chr6 18358490 18363508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1377 587 683 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 4.88e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1377 - - gmx:100809081 1249.57