Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1368 ATGGCCCCTCCACTTTATAGTGGCTTCAATGGAGAAATAATCGATGGTGAAAATCTACCTTATGCTTTTGATATCTGGGCAACCGATCTCTTTGGATGGGGCTATCATGATCATCATCATCATCAACCTATTTCGGATAACAACACTTCTACATTGGTTCATCCCTTTTGCGATGGTCCCATGATCAGGGACAACAAAAGGGTGAAGAGAACCGTGTGCTTCCCAATTTATAATAACGTTAATAGCCATAGTTTCCTCAATACCAACACCAGTAGTAAGAATAGCATACCAAAACTCCACTTCAGAGATCACATACGGACTTACACGCAGAGATATCTCGCAGCTGAACCCGTAGAAGAAGACGCATCATCGGAAGATGTAAATTACAGTTCAGAAAGTGGTGGAGGAAGCGAAGAAGATGGTTGTACTGCTGATGGAGTGAGGCTGGTTCAACTTCTGATAGCGTGTGCGGAAGCCGTGGCTTGCCGCGACAAATCACACGCTTCCATATTACTATCTGAACTCAAAGCCAACGCTTTGGTGTTCGGATCATCATTCCAAAGAGTTGCTTCCTGTTTCGTCCAAGGCCTGACCGAGAGGCTGAATCTGATTCAGCCTATCGGATCCGGTGTAGGTCCGATGCCGTCCATGATGAACATCATGGACGGAGCATCGGACGAAATGGAGGAAGCATTCAGGTTGGTTTATGAGATGTGTCCGCACATCCAATTTGGACACTATTTGGCTAATTCCACAGTATTGGAAGCCTTTGAGGGTGAGAGTTTTGTCCATGTCGTGGACCTAGGCATGAGTTTAGGTCTACAGCATGGACACCAATGGAGAGGCCTGATACAGAGCCTCGCCAGCCATGCAGAGGACGAACGCGTTCGTCGCCTGCGGATCACTGGCGTAGGACTCTGCGACAGGCTTCAAACCATCGGAGAAGAACTCTCGATATATGCAAACAATCTGGGCATCAACCTGGAGTTCTCGGTGGTGAAAAAGAATTTGGAAAATCTGAAACCAGAGGACATAGAAGTGAGGGAGGAAGAGGTTCTTGTGGTGAACAGCATTCTGCAGCTGCATTGCGTGGTGAAGGAAAGCCGCGGTGCTTTGAATTCCGTACTGCAAATGATTCACGGGCTTGGACCCAAAGTGTTGGTGATGGTGGAGCAAGACTCGAGTCACAATGGACCATTTTTCCTAGGGAGGTTTATGGAGTCACTGCACTATTACTCATCCATTTTTGACTCATTGGACGTTATGCTGCCAAAGTATGACACTAAGAGGGCAAAGATGGAACAGTTTTACTTCGCGGAGGAGATAAAGAACATTGTGAGCTGCGAGGGGCCGTTGAGGATGGAGAGGCACGAGAGGGTGGATCAGTGGAGAAGGAGAATGAGTAGGGCTGGGTTTCAGGCTGCGCCTATGAAGATGGTGACTCAGGCGAAGCAGTGGCTTATGAAAAACAAGTTAGACCCGGATATAGCGTTGTTCAACGCAATAAAAATTTGGGTCAGAATAATACTTCTTTTCAGTAATTATGTGTTGTGGTGTGGCTGCTCGGGTCCGAAGTTCGAACAGATGAAATAA 1593 0.4702 MAPPLYSGFNGEIIDGENLPYAFDIWATDLFGWGYHDHHHHQPISDNNTSTLVHPFCDGPMIRDNKRVKRTVCFPIYNNVNSHSFLNTNTSSKNSIPKLHFRDHIRTYTQRYLAAEPVEEDASSEDVNYSSESGGGSEEDGCTADGVRLVQLLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLTERLNLIQPIGSGVGPMPSMMNIMDGASDEMEEAFRLVYEMCPHIQFGHYLANSTVLEAFEGESFVHVVDLGMSLGLQHGHQWRGLIQSLASHAEDERVRRLRITGVGLCDRLQTIGEELSIYANNLGINLEFSVVKKNLENLKPEDIEVREEEVLVVNSILQLHCVVKESRGALNSVLQMIHGLGPKVLVMVEQDSSHNGPFFLGRFMESLHYYSSIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPMKMVTQAKQWLMKNKLDPDIALFNAIKIWVRIILLFSNYVLWCGCSGPKFEQMK 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1368 530 PANTHER DELLA PROTEIN RGL1-LIKE 37 493 - -
Aed6g1368 530 MobiDBLite consensus disorder prediction 117 140 - -
Aed6g1368 530 Pfam GRAS domain family 149 488 IPR005202 -
Aed6g1368 530 ProSiteProfiles GRAS family profile. 140 524 IPR005202 -
Aed6g1368 530 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 493 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1368 Aed-Chr6 18314832 18316660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1368 146 472 GRAS Transcription Factor Family AT5G17490 37.015 3.84e-61 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed6g1368 GRAS 1.2e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1368 - - gmx:100813548 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1368 6 18314832 18316660 Aed6g1368 6 18314832 18316660 ECH