Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1366 ATGGCAGCCGGTTGCCGATTGTTCGTTATCCCGGCGGCGAGGCCCGTCCTCGTGAAAAACGTGTTCTTCATGTCCACATATTCTTCTCGCACGGTCGGAGCGTGCGAGCCCTCGTCTTCCTCTGCTGCTGCGGCGCTTGCGGAGGAGGAAGAGTCCCGAAACGTGAGGGTTTGGGCGTGGTGGGACTTCAAAAACTGCCACGTGCCCCCCGGTTTCGAAGCTTCCAAAGTTGCCCCCACCATAATGGAGGCAGTTAGAGCCAACGGAATCAAAGGCCCTCTCAACATCACCGCCTTCGGCGACGTTCGACTCCTCCCCCGCCCCCATCAGGAAGCACTCGCCTACACCGGCGTTCGCTTCACCCACGTCAACGATGGAAGGAGCAGTACTGATATTCTCGTTGACCTAATGTACTGGGTTTCGCAAAACCCTCCACCCGCGCATATATTCTTGATATCTGGTGACACAGACTTCGCCGGCGTATTGCATAGGTTGAGAATGAGCAACTACAATATCTTGCTTGCTACTCCAGAGAGCGCTCCTAGTGTTCTCCACAGCGCCGCCACTCTCGCGTGGCACTGGAATTCGTTGCTTAAGGGAGCAGGAGGAGGAGGAAATAATCTTACTGGAAAATGTTTCAACCATCCTCCTGATGGGCCGTATGGCTCTTGGTATGGAACCTACAAGCCGGAGCCACTGGCTTGTCGAGATAACAAGCCGTTGGCTGCGGCTCAGGAGGCGGCTGCTGCTGCTGCTGCCTCTTTGCCCAATGTGGAGGTCTGTGAGCAGCCTTCTTCATGGGGCTCGGTTCCAAAATCAGTTGTGAGGCAGGTTAGGCGTATACTGAGTTTGCATCCAGAAGGGATGGACATTTGTATTCTTCGCGCTGAGTTGGCAAAGTGTGGTGTGCATTTGGACAAGAGTTTGTTTGGACATAAAAGTTTTTCCCGCTTTCTGTTGTCGTTGCCACGTGTACAGCTTCAACCTGGTGGTGGCGGTTATATTCGTGTGCATTTTGTTCCTTCAGAATCCCCAGAACCTTGTGAGAGCAGCTCTGCTGTGGGTGTGAAGAATGAGGAGAAAGAACGTGCAGCGGCTACAAAAGTAAATGGTGATGATGGAAATAGTAAGGTTAGGGGTGCTGATGAGAAATTCTCAAGTGCCTCGGTCCTTGAAAGGAGTTCAAAGGTAAATGGTGAGGGTAAAAATAAGGTTAGGGGTGCCGATGAGAAATTTTCAATTGCTCCGATCCTTGAAAAAAGAAGTTTGGATGATGATTTAATTTCAGTTCAACTGGGGCCTTCACAAGGGAGATCCAATGAGAAACATGTGGATGGTGAATCGTCATCTCCTGTGTTGGTTGAGAGGCATGTTTGTCAGCCACCAAATGAGTTGTGGAAATCTTCTGTGGTTAATGCACAACAGTCAGAGACTCAATTGCCACCCATGGACTACAAAGATTCTGAAACCAAGATGGATTCCTTAAAAATGACATCTCAAAAATCGTCTGATAATGACTTTCTTAGGTCTGAAGATGCTCAACCAATGGTGGAAAACAACATTATCGCAAATTATGAATCTGAAAATTTTGTAGCAAAGAACAAATGTGAGGATCCAACTAGAATGGAGGTTGATGAAGTTGTTCACAGCCCATCTTCTTCACCAGTTGATAGCGCTCCAGTTGTCCAAACACCTGGTGTAAGTGCTGAAACTAATAACAGAAGTCCAACATTCTTTAGCTGGATTAGAAGATGGTGGCCATTTGGGAAAAGCAATGAAAAGTATGATGATTTGATCGCTCATCAGAACAAGGCGGTTAGTCATGTTGAGGATTCCAAGTTATCTGAACTGGATCAGACTGTTCGTCAATCTGAAGAGCCCAAATTATCAGAACTGGATCAGAATGTTAGTCTTTCTGAAAACCCTGAGTTATTTTCTAGTTCTTCCTTTTGGAAGGATTTAGAATCTTTTATTTTTGCCCCCAAGGGATCACTTCTTTTCTCCCAGTCAAGAAGCAGGGAGGATGTTGTGCATAAATTACAAAATGAGGGATCTCTGGTTCTTAGATCACTCCCCAAAGAAGACATCCTTCAATTGGTGGAATTGTTAATAGCAGAGAAAAAATGGTTGGAGGAAAGCCCCTCCCAACCATTTCCTTTTAAGCTAATTCGACCAGTTCAGAAGAATTCATTGGTGAACCAATCCCCTGCCTCAAATGGTTTGAGATCCCTCTTTATTAGGAGAACATCAAAGTCTAACTTGAAAAAATCATTGGAACATGATGTGGAGAAACACAATCAGAGTATTTCTCATGCTCGAGTTTCTGCACCGGCGGCTACTGAAACAAAATATACTGAGACTGAGAGATCTAGAAATGATATATTAGAAGACTGTAAGAAACTTGTGAGTGAGATACTAAGTGAACACCCGGAGGGGTATAATATTGGCGCTTTTCGAAAACTATTTGTTCTTAGGTATGGCTATCATCTTGATTTACAGAAGCTTGGTTATCAAAAGTTGGCAGCCTTGCTACAGATAATGCCTGGGGTTAAATTAGAGTCCACTTATATTTTTCCTTCTTTTCCTGCTGTCTGTGATTCTGACTTGGAAACTTCTATCCTCAAAACTCAAGCATCCACTGATATTCATACAGCTTCCAACTCTGATAGTGAATTATCTGAGTCAGCCTCGAAAGATTATAAAATTGAATCCCCATGGCAGGAGTTAGGTCCTGCTTCTATCAACAACTCTGACAAGAATGATTTGGAATCAAAGTCAAGTCAGAAAGCTATGGAGCTGAATACATCAAAATCAAAGCATCCTGATTATGAACCTGTCATGTCAGATGATGAGTTTTCTTCATCTGAAGGAGATGGCTCTTGTTTAACTCAATCAGAAGAGCAAAGAAAGCCAAACTGTAATGAACTAGACAGTTCTTTCTGGCAAGCTATGGATTTGTGGCACAGCAGCAAGAAGGAAGAGAATAGTTGCAAGAAGTCATCGGACAATGTTGACAGCTTGGGTGTTTCTCAGTCTGACATTTTAGATTCATCCACTGAGGCGCCAACCAGTGATACCCTTTCTCAAATTCCTTCATCGAAATACAGAGAGAATAGTGGCAAGAAGTCAGACAATGTTGACAGCTCGTACACTTCTCCAGCTGATGTTTTTAATTCATCCACCGAGTCATCTAGGGACGCCTTTTCCAAAACTCCTTCATCGAATTACAGAGAGAAGCAAATGTCTCATAAGAAATATTCCTTCGTTGCTGATCCAGTCTTACCTAGCAAGGACAAGCTGGTTGATGGCATTAATAAAGCAGATGAGTCAAAGATGCAAAACTGA 3345 0.4454 MAAGCRLFVIPAARPVLVKNVFFMSTYSSRTVGACEPSSSSAAAALAEEEESRNVRVWAWWDFKNCHVPPGFEASKVAPTIMEAVRANGIKGPLNITAFGDVRLLPRPHQEALAYTGVRFTHVNDGRSSTDILVDLMYWVSQNPPPAHIFLISGDTDFAGVLHRLRMSNYNILLATPESAPSVLHSAATLAWHWNSLLKGAGGGGNNLTGKCFNHPPDGPYGSWYGTYKPEPLACRDNKPLAAAQEAAAAAAASLPNVEVCEQPSSWGSVPKSVVRQVRRILSLHPEGMDICILRAELAKCGVHLDKSLFGHKSFSRFLLSLPRVQLQPGGGGYIRVHFVPSESPEPCESSSAVGVKNEEKERAAATKVNGDDGNSKVRGADEKFSSASVLERSSKVNGEGKNKVRGADEKFSIAPILEKRSLDDDLISVQLGPSQGRSNEKHVDGESSSPVLVERHVCQPPNELWKSSVVNAQQSETQLPPMDYKDSETKMDSLKMTSQKSSDNDFLRSEDAQPMVENNIIANYESENFVAKNKCEDPTRMEVDEVVHSPSSSPVDSAPVVQTPGVSAETNNRSPTFFSWIRRWWPFGKSNEKYDDLIAHQNKAVSHVEDSKLSELDQTVRQSEEPKLSELDQNVSLSENPELFSSSSFWKDLESFIFAPKGSLLFSQSRSREDVVHKLQNEGSLVLRSLPKEDILQLVELLIAEKKWLEESPSQPFPFKLIRPVQKNSLVNQSPASNGLRSLFIRRTSKSNLKKSLEHDVEKHNQSISHARVSAPAATETKYTETERSRNDILEDCKKLVSEILSEHPEGYNIGAFRKLFVLRYGYHLDLQKLGYQKLAALLQIMPGVKLESTYIFPSFPAVCDSDLETSILKTQASTDIHTASNSDSELSESASKDYKIESPWQELGPASINNSDKNDLESKSSQKAMELNTSKSKHPDYEPVMSDDEFSSSEGDGSCLTQSEEQRKPNCNELDSSFWQAMDLWHSSKKEENSCKKSSDNVDSLGVSQSDILDSSTEAPTSDTLSQIPSSKYRENSGKKSDNVDSSYTSPADVFNSSTESSRDAFSKTPSSNYREKQMSHKKYSFVADPVLPSKDKLVDGINKADESKMQN 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1366 1114 ProSiteProfiles OST-type HTH domain profile. 794 868 IPR025605 -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 769 783 - -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 549 571 - -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 769 788 - -
Aed6g1366 1114 Pfam OST-HTH/LOTUS domain 794 853 IPR025605 -
Aed6g1366 1114 Pfam OST-HTH/LOTUS domain 272 335 IPR025605 -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 953 976 - -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 346 384 - -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 1044 1076 - -
Aed6g1366 1114 ProSiteProfiles OST-type HTH domain profile. 270 341 IPR025605 -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 551 571 - -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 1001 1036 - -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 909 934 - -
Aed6g1366 1114 PANTHER LIMKAIN B LKAP 24 1011 IPR024768 GO:0005777|GO:0010468|GO:1903231
Aed6g1366 1114 MobiDBLite consensus disorder prediction 991 1083 - -
Aed6g1366 1114 Gene3D - 789 856 IPR041966 -
Aed6g1366 1114 Pfam NYN domain 56 188 IPR021139 GO:0004540
Aed6g1366 1114 CDD LOTUS 795 850 - -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 430 450 - -
Aed6g1366 1114 MobiDBLite consensus disorder prediction 907 976 - -
Aed6g1366 1114 PANTHER EMB|CAB71880.1 24 1011 - -
Aed6g1366 1114 CDD PIN_limkain_b1_N_like 56 177 - -
Aed6g1366 1114 Gene3D - 269 345 IPR041966 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1366 Aed-Chr6 18299243 18303512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1366 59 201 C2H2 Transcription Factor Family AT5G61190 43.836 2.48e-33 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1366 - - gmx:102661134 1512.66