Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1348 ATGGATATGGTTATAGAGGTTCTCTCCGGTGCGCACTTCTCCGGTTGGCATCCTTCTACGACGTCGTCTTCTTCTCCAACTTCCTCACATCACCCCTTCGTCATCGGTGTCTCTGGAGGCACTGCGTCGGGGAAAACCACAGTGTGTGATTTGATCATTCAGCAGCTACAAGATCACAGAGTTGTGCTCGTTAATCAGGATTCATTCTACCGCGGATTGACGAATGATGAGTTGAAACGCGTTCATGAGTATAATTTTGATCATCCTAGTACGGTCAATGCATCTGAAGTAATCATTCTGGAGGGCATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAGATATTTGTTGACGCAGATCCAGATGTAAGGCTTGCCCGCAGAATAAGACGTGATACTGTTGAGAGGGGTAGAGATGTACACTCTGTACTGGAACAGGCAAGACTCTATGCAAAATTTGTTAAGCCTGCCTTTGATGATTTTATCCTTCCATCCAAAAAATATGCTGACATCATCATACCTCGCGGGGGAGAGAATCGTGTAGCAATTGACTTGATTGTTCAACACATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAGATATATCCGAATTTGAATGTTATACAGTCTACTTTCCAGACTAGAGGCATGCACACTCTTATTCGTGACAGAGACATATCAAAGCATGATTTTGTTTTTTACTCAGATCGGCTAATTCGTTTGGTAGTGGAACATGGTCTTGGCTACTTGCCGTTTACAGAGAAACAGGTTATCACACCTACAGGCTCAATTTATACTGGAGTTGATTTCTGTAAGAAATTGTGTGGAGTATCCATTATTCGAAGTGGCGAAAGCATGGAAAATGCTTTGCGTGCTTGCTGTAAAGGGATAAAGATCGGAAAAATTCTCATTCACCGTGAAGGTGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCTAAAGATATTTCGGAGAGGCATGTTCTTCTCATGGACCCAGTACTTGGAACAGGTAACACTGCCAGCCAAGCAATCGAGCTTCTTATAAAGAAGGGAGTTCCAGAGTCCCGGATAGTATTCCTAAACCTCATTTCTGCTCCTGAGGGAATACATTGTGTATGTAATCGTTTTCCACATCTGAAAATTGTCACATCGGAGATTGACGAAGGATTAAATGACGAGTTCCGTGTCACACCAGGGTTAGGAGAATTTAGTGACCGCTACTTTGGTACGGACGATTCTTAG 1260 0.431 MDMVIEVLSGAHFSGWHPSTTSSSSPTSSHHPFVIGVSGGTASGKTTVCDLIIQQLQDHRVVLVNQDSFYRGLTNDELKRVHEYNFDHPSTVNASEVIILEGILVFHEQRVRNMMNMKIFVDADPDVRLARRIRRDTVERGRDVHSVLEQARLYAKFVKPAFDDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLNVIQSTFQTRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGYLPFTEKQVITPTGSIYTGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILIHREGGDETQLIYEKLPKDISERHVLLMDPVLGTGNTASQAIELLIKKGVPESRIVFLNLISAPEGIHCVCNRFPHLKIVTSEIDEGLNDEFRVTPGLGEFSDRYFGTDDS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1348 419 PANTHER URIDINE KINASE 14 90 - -
Aed6g1348 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 190 IPR027417 -
Aed6g1348 419 Pfam Uracil phosphoribosyltransferase 215 416 - -
Aed6g1348 419 PANTHER URIDINE KINASE 91 415 - -
Aed6g1348 419 PRINTS Uridine kinase signature 32 49 - -
Aed6g1348 419 PRINTS Uridine kinase signature 62 73 - -
Aed6g1348 419 CDD PRTases_typeI 274 376 IPR000836 -
Aed6g1348 419 Pfam Phosphoribulokinase / Uridine kinase family 88 185 IPR006083 GO:0005524|GO:0016301
Aed6g1348 419 SUPERFAMILY PRTase-like 200 417 IPR029057 -
Aed6g1348 419 Gene3D - 201 416 IPR029057 -
Aed6g1348 419 PANTHER URIDINE KINASE 91 415 - -
Aed6g1348 419 Gene3D - 94 200 IPR027417 -
Aed6g1348 419 Gene3D - 28 93 IPR027417 -
Aed6g1348 419 PANTHER URIDINE KINASE 14 90 - -
Aed6g1348 419 CDD UMPK 34 197 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1348 Aed-Chr6 18169960 18176144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1348 1 418 PRT Gene Family AT3G27190 70.146 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1348 K00876 - gmx:100816209 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1348 6 18169960 18176144 Aed6g1348 6 18169960 18176144 ECH