Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1346 ATGGTTTCGACGAGACGCAGTGGATCTCTCTCTGCCAAAAGATCTTCCACCTCGGAAGATAAACCTCCTTCGCCGAAGCGTCAAAAGGTCGACAATGGCGGTTCGTCGGAGAAACCGGTGCCGACTCCGGCGGAGAATTCCAAGGACTTATCTACTCCGGACCCCGTGCCTGATCCCGGAGAATGTGGCTCCGGCGACGCTCAGATCGCCGGAGCTGGTGCTGCCGATGGAGTGAGCTCCGGCAAGGGTGACGCTACGCCGGCTGTGCCTGTCACGGCACCGACTGCTGATGCCGCATGTCCATCGTTCTCTTCTTGGATTAATTATCAGAAACAGAATCCGATTATCGAGGGTGCGCCGTGGTGCAGGTTCTTGTCTCAGTCTGCACAGAATCCTAACGTTGCTGTTTGCACTCCCAATTTCACGATTGGTTCTAATAGAAGTTGCAACTTTCCACTGAATGATCAAACTATAAGTGGAAATTTATGCAAGATCAAATATATGCAGGGCGACGGAAGTGCTGTGGCTGTGCTGGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGGACGCATGTCAAGAAGAATACCAGTTGTGTTCTTAACTCGGGTGATGAAGTGGTTTTTGGTGTGCTTGGAAATCATTCTTATATTTTCCAGCAACTAAATACCGAGGTTGCAGTTAGGGGTGCAGAAGTTCCAAGTGGTATTGGGAAATTTCTGCCACTTGAAAGGAGAAGTGGAGACCCTTCAGCTGTGGCTGGGGCTTCTATTTTGGCTTCTCTTTCTAACAGACAGGACCTTACAAGATGGAAATCTCCATCTCAGACCTCCACTAAACCTCACCAGGGTACCGATGTCTCTAGTCATTCTGTTCATCATGATTGTACAGAAACTGAGCTTGATGGCTCAGAATCAACTCCAAACGTGCGAAGTGATAAAGCAGTAGATGTTCGAACAAGTGACAAGAATTCAACAATGGATTGCGATCCAGATGCTGGTGCAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTCAGGATCTTAGCTCGACCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTATTGGAAGAAAGAAATGGGATGCTGGATATGCAGGCTGCATCGACTTTGGGTACATCTGTCCGCTGTGCAGTGTTTAAAGAAGATGTTCATGCTGCGATACTGGATGGAAAAGAAATAGATGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAATACAAAAAATGTCCTGGTGGCTGCTTGCTTTATGCACCTCAAGCATAAAGAACATGAAAAGTTTACTGCAGATCTTACAACCATAAACCCTCGTATTCTTCTCTCTGGACCTGCAGGGTCTGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCAAAATACTTTGGAGCTAAGTTGCTCATATTTGATAGTCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGCTACTCAAAGATGGATTTAGTGCTGAAAAATCTTCCAGCTGCACTAAACAAAGTCCTACAGAAGACTTGGCTAGGAGCATAGACCCATTAGCTAGTGAAACAGAGACACCCAGCCCTTCTAATGCACCTACATCATATGGCTTTGAGTCTCAACCTAAGTTGGAAACTGATAACATACCATCCACCTCTGGGACAGCTAAAAGTTGTGTGTACAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGTGTATATCCGACATCTCCAAGAGGACCGTCTAATGGAAGTCGGGGCAAGGTTGTCTTACTGTTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAATCCATACCTGATGGAGTTGATCTTGGTGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCACTGATCTTCGTTTGGAAAGCAGTGCGGGAGATGAACTGGATAAATTACTTATTCATTCATTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAGTGCACCATTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATTGTAGGAAATGGAGATTCATATTCATTTAGAAGTAAGCTTGAAAATCTTCCAGACAATGTGGTTGTAATAGGTTCGCACACTCAAAATGACAGTCGCAAGGAAAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTTGGACGATTGCATGACAGAGGGAAGGAAGTCCCGAAACAAAGTAGATCTTTGACTAAGCTTTTTCCAAATAAAATTACAATTCATCTGCCACAGGACGAGGCTCTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTCGAGACTCTCAAAATCAAAGGAAATTTGCATCACTTGCGCACAGTTTTGGGACGCTGCGGAATGGAATGTGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCGGAGAAGATAATTGGTTGGGCTTTAAGCCACTACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCAAAGCTTGTATTGTCATGTGAGAGCATTCAGTATGGAATTGGGATCTTGCAGTCTATCCAGAATGAGTCCAAGAGCCTGAAGAAATCTCTTAAGGATGTTGTGACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATTGATGTTACTTTTGATGATATTGGAGCTCTTGAAAAAGTCAAGGATACATTGAAGGAGTTGGTGATGCTTCCTTTACAGAGACCTGAGCTTTTTTGCAAGGGGCAATTAACTAAGCCGTGCAAAGGTATCCTATTATTTGGTCCCCCTGGAACAGGTAAAACAATGCTCGCAAAGGCAATTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTTTGGCGAGTAAAATTTCACCTAGTGTTATCTTTGTTGATGAGGTTGACAGCATGTTGGGTCGGAGGGAAAACCCAGGAGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGTACGAAGGAAACAGAGCGAGTTCTTGTGCTGGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGATGCCAAGAAGATTGATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAAATATTGAAAGTTATACTAGCAAAAGAGGAAATGTCTCCTGATGTTGATTTAGATACAGTTGCAAATATGACCGATGGATATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCAGCACATCGCCCTATTAAAGAGATATTAGAAAAGGAAAAAAAGGAATGTGTTGCTGCTCTAGCCGAAGGTCGACCAGCTCCAGCATTATGCAGCAGTGGAGACGTCAGATCTTTAAACATGGAAGACTTTAAACATGCTCATCAGCAGGTATGTGCAAGTGTTTCTTCTGAATCAGTAAATATGACTGAGCTTTTACAATGGAATGAATTATATGGAGAGGGGGGTTCAAGAGTAAAGAAAGCACTCAGCTATTTCATGTGA 3675 0.4302 MVSTRRSGSLSAKRSSTSEDKPPSPKRQKVDNGGSSEKPVPTPAENSKDLSTPDPVPDPGECGSGDAQIAGAGAADGVSSGKGDATPAVPVTAPTADAACPSFSSWINYQKQNPIIEGAPWCRFLSQSAQNPNVAVCTPNFTIGSNRSCNFPLNDQTISGNLCKIKYMQGDGSAVAVLESTGSKGSVLVNGTHVKKNTSCVLNSGDEVVFGVLGNHSYIFQQLNTEVAVRGAEVPSGIGKFLPLERRSGDPSAVAGASILASLSNRQDLTRWKSPSQTSTKPHQGTDVSSHSVHHDCTETELDGSESTPNVRSDKAVDVRTSDKNSTMDCDPDAGAEAGNVKISGVNDFLRPFFRILARPSCKLKLSKSICKQVLEERNGMLDMQAASTLGTSVRCAVFKEDVHAAILDGKEIDVSFDNFPYYLSENTKNVLVAACFMHLKHKEHEKFTADLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGFSAEKSSSCTKQSPTEDLARSIDPLASETETPSPSNAPTSYGFESQPKLETDNIPSTSGTAKSCVYKLGDRVKFSCSSSCGVYPTSPRGPSNGSRGKVVLLFDDNPLSKIGVRFDKSIPDGVDLGGACEGGQGFFCNVTDLRLESSAGDELDKLLIHSLFEVVFSESRSAPFILFMKDAEKSIVGNGDSYSFRSKLENLPDNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKQSRSLTKLFPNKITIHLPQDEALLASWKQQLDRDVETLKIKGNLHHLRTVLGRCGMECEGLETLCIKDQTLTNENAEKIIGWALSHYLMQNSEAKPDSKLVLSCESIQYGIGILQSIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAKEEMSPDVDLDTVANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKECVAALAEGRPAPALCSSGDVRSLNMEDFKHAHQQVCASVSSESVNMTELLQWNELYGEGGSRVKKALSYFM 1224
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1346 1224 MobiDBLite consensus disorder prediction 1 89 - -
Aed6g1346 1224 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 74 1224 - -
Aed6g1346 1224 ProSitePatterns AAA-protein family signature. 1063 1082 IPR003960 GO:0005524|GO:0016887
Aed6g1346 1224 MobiDBLite consensus disorder prediction 535 569 - -
Aed6g1346 1224 Pfam ATPase family associated with various cellular activities (AAA) 960 1089 IPR003959 GO:0005524|GO:0016887
Aed6g1346 1224 Gene3D - 120 229 - -
Aed6g1346 1224 MobiDBLite consensus disorder prediction 270 333 - -
Aed6g1346 1224 MobiDBLite consensus disorder prediction 1 18 - -
Aed6g1346 1224 SUPERFAMILY SMAD/FHA domain 108 221 IPR008984 GO:0005515
Aed6g1346 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 918 1201 IPR027417 -
Aed6g1346 1224 SMART AAA_5 956 1093 IPR003593 -
Aed6g1346 1224 MobiDBLite consensus disorder prediction 288 302 - -
Aed6g1346 1224 Coils Coil 880 900 - -
Aed6g1346 1224 MobiDBLite consensus disorder prediction 19 33 - -
Aed6g1346 1224 Gene3D - 1092 1186 - -
Aed6g1346 1224 ProSiteProfiles Forkhead-associated (FHA) domain profile. 141 194 IPR000253 GO:0005515
Aed6g1346 1224 Pfam FHA domain 142 211 IPR000253 GO:0005515
Aed6g1346 1224 Pfam AAA+ lid domain 1113 1148 IPR041569 -
Aed6g1346 1224 CDD AAA 958 1091 - -
Aed6g1346 1224 CDD FHA 141 221 IPR000253 GO:0005515
Aed6g1346 1224 MobiDBLite consensus disorder prediction 270 287 - -
Aed6g1346 1224 Gene3D - 918 1199 IPR027417 -
Aed6g1346 1224 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 74 1224 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed6g1346 Aed-Chr6 18148581 18161074 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1346 919 1167 Calmodulin-binding Proteins AT3G56690 39.062 8.09e-41 162
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1346 - - gmx:100816731 2264.19
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1346 6 18148581 18161074 Aed6g1346 6 18148581 18161074 ECH
Aed6g1346 6 18148581 18161074 Aed10g0815 10 6761932 6772252 PCT