Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1342 ATGGCCACCACCACCACCACCAGTCTTGGCGGCGGCGCCGGTGGAGACGACCGCGTCCTCGCGACGGCTCAGCAAATCGTGAAGAGCCTCAGAGGCGCGAAAGAGGATCGCGAAGACATGCTTATGATCTTCTCCGCCTTCGATAACCGCCTCTCCGGCATCTCCGACCTCATCAACGGCGACGATTCGAAGTCTTCTGATGAAGAGGAGCTGGACCGCTTTGAAGCCGCCGAGAAAGTGATTCTCGCTGATGCGTCTCTCTCCGGCCAGCCTTCGCGTCAATCCACGTCGCTCTTCAACCCTCCGAACAATCCCGTGGAGTACTTCTCCGCCGTCGACGAGATCATCCACTGGATGGAGCAGTTCTCGATCGCGCCGCCGTCCTCCTCCGCGGCACGCAACGGCCAGGTCATCGTGGACCGCGCCGAGAACGCGATTCAGCTCGCGATGTCGCGGCTCGAGGAGGAGCTGCGCCACGTGCTGATTTGCAACACGATCCCTCTCGACGCCGTGAGCCGCTGCAGCTCGATCAGGAGGGTTTCGCTCTCGTTCAGCTCGCACGACGGCGGCGGCGGCGGCGGCGCAATCGACGACTCCCCGCTAGAGAGCTTCGGCGAGGTCGGCTCGAGCCGCTTCCACTCACGCGGCGTGAGCCTCGGCGACGATTTGTTCGTCGATTTGGTGCGTCCCGAGGCGGTTCAGGACCTCAGAGAAATCATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGTAGCGTTCGTCGCGACGCTTTGGATGAGTGTTTGGTTATTCTCGGCGTTGAGAGGTTGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGCGGAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTTAAGGTTGCTGTTGGAATGCTTCTCAGTGGCGAGAAGAGGCTCTGTGATGGTTTGTTTGGGGATTTGGATGATTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGCTGTGTCATGCAGTTGCTGAATTTCGGTGAGGCTGTTGCGATTGCTAAGCGGTCGCCAGAGAAGTTGTTTCGGATTTTGGACATGTATGAGGCTTTGAGGGATGCTATGCCTGATTTGCAGTCCATGGTTTCTGACGAGTTTGTGATTGGTGAAGCCAATGGAGTGCTGAGTGGGCTTGGTGAGGCTGCCAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGAAACGAGACTTCGAAGAAGCCGGTCATAACTGGGGATGTTCATCCCTTGCCTCGTTATGTCATGAATTATCTCAAGTTGCTTGTTGATTATGGTGCCCCTATGGATTCGCTTTTGGAGATTAGTGAGGAGGATCTCTATCGATTTAAGAATGATCTTGGTGGTGATGGTTCACAGTTAGAGGCTATGTCGCCCTTGGGGCGGCGGATTCTGTTGCTCATGTCTGAACTTGAGTACAATCTTGAGGAAAAGTCAAAGCTTTATGAAGACGGTGCACTGCAGCAGGTGTTTCTGATGAACAATCTCTATTACCTTGTGCGGAAAGTGAAGGACTCGGACCTTGGGAAGGTCTTGGGGGATAATTGGATCAGGAAACGCCGTGGTCAGATACGCCAGTATGCTACGGGGTATCTCAGAGCCTCTTGGAGCAAGGCCTTGTTTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCATCGAAGATGGCTTTGAAGGAGAGGTTCAAGAGTTTCAATGCTTGTTTCGAAGAAATTTACCGGGTTCAGACAGCTTGGAAGGTACCGGATGATCAGCTTCGTGAGGAGCTGCGGATATCTATATCAGAGAAGGTGATTCCCGCATACCGCTCGTTTGTGGGAAGGTTTAGTGGTCAGTTAGAGGGAAGGCATGCCTGGAAGTACATTAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGGAAAAATACATAG 2013 0.5216 MATTTTTSLGGGAGGDDRVLATAQQIVKSLRGAKEDREDMLMIFSAFDNRLSGISDLINGDDSKSSDEEELDRFEAAEKVILADASLSGQPSRQSTSLFNPPNNPVEYFSAVDEIIHWMEQFSIAPPSSSAARNGQVIVDRAENAIQLAMSRLEEELRHVLICNTIPLDAVSRCSSIRRVSLSFSSHDGGGGGGAIDDSPLESFGEVGSSRFHSRGVSLGDDLFVDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQKVEWRSLDEKMKNWVQAVKVAVGMLLSGEKRLCDGLFGDLDDLKEICFNETAKGCVMQLLNFGEAVAIAKRSPEKLFRILDMYEALRDAMPDLQSMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGAPMDSLLEISEEDLYRFKNDLGGDGSQLEAMSPLGRRILLLMSELEYNLEEKSKLYEDGALQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSKALFCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFSGQLEGRHAWKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKNT 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1342 670 Gene3D Exocyst complex component Exo70 93 662 - -
Aed6g1342 670 Pfam Exo70 exocyst complex subunit 294 652 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed6g1342 670 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 58 669 - -
Aed6g1342 670 Coils Coil 139 159 - -
Aed6g1342 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 669 IPR004140 GO:0000145|GO:0006887
Aed6g1342 670 SUPERFAMILY Cullin repeat-like 102 656 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1342 Aed-Chr6 18118952 18120964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1342 17 669 EXO70 exocyst subunit family AT5G50380 59.064 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1342 K07195 - gmx:100818693 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1342 6 18118952 18120964 Aed6g1342 6 18118952 18120964 ECH
Aed10g0768 10 6310030 6315030 Aed6g1342 6 18118952 18120964 PCT