Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1340 ATGTTGAATCCGTCACTAACTCTCACTATGATTTACTTGGATCTTACGTGGGAAGTACTTGACGAAGAGGAAGCAGCGAATGTTGCAAAGCATCCCAATGTAATATCAGTTTTCTTAAACAAAGAACGGAAATTGCACACAACACACTCATGGAATTTCCTTGGGTTAGAGAAAAGAAATGGTGTATATCCACGTGAGTCAGTATGGCGAAAGACTAAGGGTGAAGATATCATTATTGCAAATATCGATACAGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTCGGACCCATCCCAAAACGGTGGCGTGGAATCTGTCAAAAAGAACATGAAGTTCAGTGCAACAGGAAGCTTATTGGAGCAAGATATTATTACAAAGGTTACGAGGCTATTAATCGTAAAAAAATGAATGCCTCTAAGCTTAGTGCACGTGACTACGTAGGTCATGGTTCACATACTCTATCAACAGCAGGTGGTAGCTTTGTTCGCGGAGTTAGTGTGTCTGGCTTTGGCAATGGAACTGCAAGTGGTGGATCACCAAAAGCTAGAGTTGCAGCCTATAAGGCGTGTTGGCCAACTTGTGCTGATGCAGACATTTTGGCTGCTTTTGAAGCTGCCATGAGTGATGGTGTTGATGTGATTTCAATGTCTTTGGGAGAAGATTATCCCCCAGAATATTTTGAAAGCCCTATATCCATAGGGTCCTTCCATGCAGTTTCCAACGGCATAGTAGTAGTGGCTTCCGGAGGAAATTCAGGACCTACTCCTGGAACTGTATCCAACAACGAACCATGGATACTCACAGTTGCAGCAAGCACAATTGATAGAGACTTTTCTAGTTTTGTTAGGCTTGGTAACAAGAAAGTCCTCAAGGGAGCTAGCATTTCAAAGTATGCCTTACCATCTAATAAGATGTACCCATTGATCAGTGCTGTTGATGCCAAAACTAAAGATGCATTTGCTGCCAATGCCCTTTTGTGCCTGAATAGTACTCTTGATCCTGAGAAGGTTAAGGAGAAAATATTGGTCTGTCTTCGCGGTGTTATTAGTAGAATTGAAAAGGGTATGGTAGCTGCTAGTCTAGGTGCTGTTGGAATGATTTTGGCTAATGACAAGGTCTCAGGGAATGAAATTTCATCCGATGCCCATGTGCTTCCTGCTTCACATGTTACCTTTGCTAGTGGCAGTTACATTTATAGTTACATCAACCGCACCAAGTCTCCCGTGGCTTACATTTCCAAAGCGAAAACAGAACTGGGTGTAAAGCCAGCTCCTTTCGTGGCTTCATTTTCATCAAGGGGCCCCAATCTCCTTGAGCCAACAATCCTCAAGCCTGATGTCACTGCACCAGGAGTCGGCATCATTGCTGCTTTCACTGAAGACATAACTCCCACAAATGAATCATCTCCTTACAATACATTGTCCGGTACTTCAATGTCATGTCCTCATGTTGCTGGTCTTGTTGGGTTGCTCAAAGCCCTTCATCCAGATTGGAGCGCAGCTGCTATTAAGTCAGCAATCATTACCTCGGCAACTACAAAAGACAACTCTAGAAGGCAAATTGCAGATTCATCATTAGTGAACGAGGCAAGTCCATTTGACTATGGAGCAGGGCACATTCGACCTAATCGTGCTGCGAACCCTGGACTTGTATATGACCTAAACACCAGTGATTATTTGAACTTTTTGTGTAGTCGTGGCTACAACGCTTCTCAGCTTAAATTGTTCTATGGCAAACCTCACACTTGTCCGAAGTCGTTCAGTTTAGCAGATTTCAATTATCCAACAATCACAGTTCCTCGGATTGTCCTTGGACATGCTTTCAATGTTACTCGAACTGTTACCAATGTTGGGTCCCCAAGCAAGTATAGAGTGCGCATCAAGGCACCACGACATGTTCTAGTATCAGTTGAGCCTAGTGAACTAAGGTTCAAGAAAAAGGGTGAAAAAAAGGAGTTTAGAGTTACATTGACATTGAAGCCTCAAACTAATAAGAACACCACTGGTTATGAATTCGGGTGGTTCACGTGGACTGATCACAAGCACCATGTCAGGAGTGCTATTGTTGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTCGGACCCATCCCAAAACGGTGGCACGGAATCTGTCAAACAACACGATAAATTTAACTGCAACAGGAAGCTTATTGGAGCAAGGTATTTTTACAAAGGTTATGAGGCAAGTAGTGGTATAAAACCGAATGCCTCAGAGCTTAATGCACGTGACTACCAAGGTCACGGTTCACATACTTTATCAACAGCTGGTGGTAACTTTGTTCCCGGAGTTAGTGTATTTGGCTTTGGCAATGGAACTGCAAGTGGTGGATCACCAAAAGCTAGAGTTGCAGCCTATAAGGTCTGTTGGCCAGCGACTAGCGTAGCCGGTAGTGGTGGATGTTTTGATGCAGACATCTTGGCTGCTTTTGAAGCTGCCATAAGTGATGGAGTTAATGTGATTTCGATGTCTTTGGGTTCAGATGTTGTTGAGGAATATTTCCAAGACGCTGTTTCAATAGGGTCCTTCCATGCAGTTGCCAACGACATAACAGTAGTGGCTTCTGGAGGAAATTCAGGACCTAGCCTTGGAACTGTATCCAACATTGAACCATGGACGCTCACAGTTGCAGCAAGCACAATTGGTAGAGACTTCGCTAGTTATGTTACACTTGGTGACAAGAAAATTATCAAGGGAACTAGTCTTTCCGAGAATCACTTACCATCTAATAAGACGTACCCATTGAGTAGTTCTACTGATGCCAAAGCTAATAATGTGTCTGTTGTGGACGCTGTTTATTGCTATGATGGAACTCTTGATCCTAAGAAGGTAAAAGGGAAAATATTGGTCTGTTTTACTGGGGGAGCTGCCACTGATGTTGAAGCTATTAGCGTAGGCGCTGTTGGATTGATTTTGGCTGATGACGGCTCAGGGCTTGAGATTCTAGCTGACCCCCGTTTGCTTCCTGCTTTAAATGTTGACTTTGAGAATGGCAATTACATTTATAATTACATCAGCAGCACCGAGTCTCCTGTGGCTTACATTTCTAGAGTGAAAACAGAATTGGGTTTGAAGCCAACTCCATTTGTGGTACCATTTTCATCAAGAGGCCCCAGTCAACTTGAGGCAACAGTCCTCAAGCCTGATATCACTGCTCCAGGAGTCAACATCATTGCAGCTTATAGTGCAGCCGTATCTCCCACAGGACAAGATTCTGACAAACGAAGAACTCCTTACTTTGCATTGTCTGGAACTTCAATGTCATCAACTACAATAGATGGAAGGTCAATCCTGGATTCATCATTAGTGAACGAGGCAAATCCATTTGACTATGGAGCAGGGCACATTCGACCTAATCATGCTGCGGACCATGGACTTGTATATGACCTAAACACCATTCCTCGGATTGTCCTTGGACATGCTTTCAATGTTACTCTAACCGTTACCAATGTTGGGTCCCCAAGCAAGTATAGAGTGCGCATCAAGGCACCACGACATGTTCTAGTATCAGTTGAGCCTAGTGAACTAAGGTTCAAGAAAAAGGGTGAAAAAAAAGAGTTTAGAGTTACATTGACCTTGAAGTCTCAAACTAATAAGAACACCATTGGTTATGAATTCGGGTGGTTCACGTGGACTGATCACAAGCACCGTGTCAGGAGTCCTATTGTTGTTAACATTCAGCATTAA 3723 0.4335 MLNPSLTLTMIYLDLTWEVLDEEEAANVAKHPNVISVFLNKERKLHTTHSWNFLGLEKRNGVYPRESVWRKTKGEDIIIANIDTGVWPESKSFSDEGFGPIPKRWRGICQKEHEVQCNRKLIGARYYYKGYEAINRKKMNASKLSARDYVGHGSHTLSTAGGSFVRGVSVSGFGNGTASGGSPKARVAAYKACWPTCADADILAAFEAAMSDGVDVISMSLGEDYPPEYFESPISIGSFHAVSNGIVVVASGGNSGPTPGTVSNNEPWILTVAASTIDRDFSSFVRLGNKKVLKGASISKYALPSNKMYPLISAVDAKTKDAFAANALLCLNSTLDPEKVKEKILVCLRGVISRIEKGMVAASLGAVGMILANDKVSGNEISSDAHVLPASHVTFASGSYIYSYINRTKSPVAYISKAKTELGVKPAPFVASFSSRGPNLLEPTILKPDVTAPGVGIIAAFTEDITPTNESSPYNTLSGTSMSCPHVAGLVGLLKALHPDWSAAAIKSAIITSATTKDNSRRQIADSSLVNEASPFDYGAGHIRPNRAANPGLVYDLNTSDYLNFLCSRGYNASQLKLFYGKPHTCPKSFSLADFNYPTITVPRIVLGHAFNVTRTVTNVGSPSKYRVRIKAPRHVLVSVEPSELRFKKKGEKKEFRVTLTLKPQTNKNTTGYEFGWFTWTDHKHHVRSAIVVFGLNPRVLVMKGSDPSQNGGTESVKQHDKFNCNRKLIGARYFYKGYEASSGIKPNASELNARDYQGHGSHTLSTAGGNFVPGVSVFGFGNGTASGGSPKARVAAYKVCWPATSVAGSGGCFDADILAAFEAAISDGVNVISMSLGSDVVEEYFQDAVSIGSFHAVANDITVVASGGNSGPSLGTVSNIEPWTLTVAASTIGRDFASYVTLGDKKIIKGTSLSENHLPSNKTYPLSSSTDAKANNVSVVDAVYCYDGTLDPKKVKGKILVCFTGGAATDVEAISVGAVGLILADDGSGLEILADPRLLPALNVDFENGNYIYNYISSTESPVAYISRVKTELGLKPTPFVVPFSSRGPSQLEATVLKPDITAPGVNIIAAYSAAVSPTGQDSDKRRTPYFALSGTSMSSTTIDGRSILDSSLVNEANPFDYGAGHIRPNHAADHGLVYDLNTIPRIVLGHAFNVTLTVTNVGSPSKYRVRIKAPRHVLVSVEPSELRFKKKGEKKEFRVTLTLKSQTNKNTIGYEFGWFTWTDHKHRVRSPIVVNIQH 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1340 1240 Pfam Subtilase family 74 518 IPR000209 GO:0006508|GO:0008236
Aed6g1340 1240 Gene3D Peptidase S8/S53 domain 707 1106 IPR036852 GO:0004252|GO:0006508
Aed6g1340 1240 ProSiteProfiles Serine proteases, subtilase domain profile. 50 549 - -
Aed6g1340 1240 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1107 1143 IPR045051 -
Aed6g1340 1240 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1144 1238 IPR045051 -
Aed6g1340 1240 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 693 IPR045051 -
Aed6g1340 1240 SUPERFAMILY Subtilisin-like 719 1138 IPR036852 GO:0004252|GO:0006508
Aed6g1340 1240 SUPERFAMILY PA domain 337 408 IPR046450 -
Aed6g1340 1240 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 19 693 - -
Aed6g1340 1240 Pfam PA domain 324 399 IPR003137 -
Aed6g1340 1240 Gene3D Peptidase S8/S53 domain 76 562 IPR036852 GO:0004252|GO:0006508
Aed6g1340 1240 CDD PA_subtilisin_like 285 415 - -
Aed6g1340 1240 Pfam Subtilase family 738 1103 IPR000209 GO:0006508|GO:0008236
Aed6g1340 1240 ProSiteProfiles Serine proteases, subtilase domain profile. 711 1134 - -
Aed6g1340 1240 CDD Peptidases_S8_3 44 515 IPR034197 -
Aed6g1340 1240 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1107 1143 - -
Aed6g1340 1240 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1144 1238 - -
Aed6g1340 1240 Gene3D - 566 695 - -
Aed6g1340 1240 SUPERFAMILY Subtilisin-like 45 553 IPR036852 GO:0004252|GO:0006508
Aed6g1340 1240 Gene3D - 1140 1239 - -
Aed6g1340 1240 Pfam Fibronectin type-III domain 1152 1236 IPR041469 -
Aed6g1340 1240 Pfam Fibronectin type-III domain 594 693 IPR041469 -
Aed6g1340 1240 CDD PA_subtilisin_like 900 1027 - -
Aed6g1340 1240 PRINTS Subtilisin serine protease family (S8) signature 148 161 IPR015500 -
Aed6g1340 1240 PRINTS Subtilisin serine protease family (S8) signature 74 93 IPR015500 -
Aed6g1340 1240 PRINTS Subtilisin serine protease family (S8) signature 478 494 IPR015500 -
Aed6g1340 1240 Gene3D - 894 1034 - -
Aed6g1340 1240 Gene3D - 278 422 - -
Aed6g1340 1240 ProSitePatterns Serine proteases, subtilase family, serine active site. 479 489 IPR023828 -
Aed6g1340 1240 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 717 1106 - -
Aed6g1340 1240 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 717 1106 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1340 Aed-Chr6 18089837 18100364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1340 19 693 Subtilisin-like Serine Gene Family AT5G59810 58.952 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1340 - - vun:114175516 977.622