Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1331 ATGGGAAAAGCATCAAAGTGGTTTCGCGGGCTTCTCGGTCTCAAAAAAACAGAGTACACTACTTCACCCGCCAAGCCTCCCAAAGAGAAGCGCCGATGGAGCTTCGTTAAATCATCACACACAGAAAAAGACAACACCACTACAGCCACGTGTACACCACAAAGAGACAACAACAACAACAACAACAACAAGCACGCCATGGCAGTGGCAGCAGCCACCGCTGCGGTGGCGGAAGCCGCGGTAGCTGCAGCCGAAGCCGCCGCCGTCGTTGTCAGACTCACAAGCAGCAGCGGAAGGTGCGCCAACGCCGGACCCACCAGGATTCGCCAACATTGGGCCGCCGTTAAGATCCAAGCCGCTTTTCGTGGATGTCTGGCAAGGAGAGCACTGCGAGCATTAAAGGGGTTGGTGAAGTTGCAAGCATATGTGAGAGGTCACATTGAGAGGAAGCGTACAGCAGAGTGGCTGAAAAGAGTGCAATCACTCTTGCATGCACAGGCACAAGTTTCTGCAGGGTTGACCACCCTGCATGCCTCACCTTCCAGTTCAAAGTTATCTAGCCACCTCCATGGTCCAGAAACACCCGAAAAATTTGAAAGCCCCATCAGATCTAAGAGCATGAAACATGAGCAGTCACCTATACTCAAGAGAAATGGCTCCAAATCCTGTGTTCTGATCAACGGCTATCAAGAGATATGTGGGGGGAGTAGATCAGAGAGTCAAGTAAATGAACAATCATGGAACTCAGGAAGATCATTAATAAGAACATTCAGCTCCAACGATGAAAGAAACGACAGGGTTCTTGAAATTGATTCTGGAAAACCACCAAACTTCACACTAAAGCGTAGAAACCTCTCTTACTCCACAGGCTCTGATAATCATTACAGCAAGAGTTTGAACAGCACAAAGGAATCAACAGCGTCTCTTCAATCTGGACAAAGTCCATCATGTTGTGAAGTCCAGTCTCACAGTTACATCTCACAAAAAGTAAACGAAGTTGAGGAGAGTCCATTCTGCACTGCTGACAATAGTCCTCAATATTTATCTGCCACTTCTAAAGATGATGGTTTCAAAAGAAGCCCTTTTACTCCTACCAAGAGTGATGGCTCTAGATGCTACTACATTCGTGGTTATGCTGATTACCCAAGCTACATGGCATGCACTGAATCTTCAAAGGCAAAGGTGAGATCTTTGAGTGCACCAAAACAAAGGCCTCAACAATCTGAGAAATCTGGTTCATCTAATAGATACTCACTTAATGCATTTGATATGTCAAGATTGGCCACACAGAGGGCAATGCATGCAAGCTTCACCAACAAAGCTTATCCTGGTTCTGGCCGTTTGGACAAGCTTGGTATGCCTGTGGGGTACAGATTCTGA 1380 0.4696 MGKASKWFRGLLGLKKTEYTTSPAKPPKEKRRWSFVKSSHTEKDNTTTATCTPQRDNNNNNNNKHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSSSGRCANAGPTRIRQHWAAVKIQAAFRGCLARRALRALKGLVKLQAYVRGHIERKRTAEWLKRVQSLLHAQAQVSAGLTTLHASPSSSKLSSHLHGPETPEKFESPIRSKSMKHEQSPILKRNGSKSCVLINGYQEICGGSRSESQVNEQSWNSGRSLIRTFSSNDERNDRVLEIDSGKPPNFTLKRRNLSYSTGSDNHYSKSLNSTKESTASLQSGQSPSCCEVQSHSYISQKVNEVEESPFCTADNSPQYLSATSKDDGFKRSPFTPTKSDGSRCYYIRGYADYPSYMACTESSKAKVRSLSAPKQRPQQSEKSGSSNRYSLNAFDMSRLATQRAMHASFTNKAYPGSGRLDKLGMPVGYRF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1331 459 MobiDBLite consensus disorder prediction 36 62 - -
Aed6g1331 459 SMART iq_5 109 131 IPR000048 GO:0005515
Aed6g1331 459 SMART iq_5 132 153 IPR000048 GO:0005515
Aed6g1331 459 Pfam Protein of unknown function (DUF4005) 345 429 IPR025064 -
Aed6g1331 459 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 454 - -
Aed6g1331 459 MobiDBLite consensus disorder prediction 265 315 - -
Aed6g1331 459 MobiDBLite consensus disorder prediction 279 315 - -
Aed6g1331 459 PANTHER IQ-DOMAIN 5-RELATED 1 454 - -
Aed6g1331 459 Gene3D - 108 161 - -
Aed6g1331 459 MobiDBLite consensus disorder prediction 176 215 - -
Aed6g1331 459 MobiDBLite consensus disorder prediction 40 62 - -
Aed6g1331 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 158 IPR027417 -
Aed6g1331 459 MobiDBLite consensus disorder prediction 190 215 - -
Aed6g1331 459 MobiDBLite consensus disorder prediction 395 416 - -
Aed6g1331 459 Pfam IQ calmodulin-binding motif 111 131 IPR000048 GO:0005515
Aed6g1331 459 Pfam IQ calmodulin-binding motif 137 151 IPR000048 GO:0005515
Aed6g1331 459 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Aed6g1331 459 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1331 Aed-Chr6 18016799 18021769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1331 1 459 IQD Protein Family AT4G23060 40.678 1.81e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1331 - - gmx:100793587 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1331 6 18016799 18021769 Aed11g1697 11 20655136 20657751 PCT