Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1327 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGGCACAGATTGAGGAGCGAAGCACCTGTAGCACAGTTTCAAGCCTGTCACTTCCAGCTACCTTCTTCCATGAGCACGCAAAGATTGGACCTGCCATCATGCACCACCTTCAGTAGCCGCAGCAGCAAAGACACCACCACCACCTCTTCACGCTCTGTGGGGATCTCAGTGGAGAAACCAATCGAGGCCAGGACCAGCACCTGTTCTCTCAAGCAACACATTCGACTCCCACCTCTGGCCATCACTGCAGCACCAGCACCATTGCTGGAACAGGAATCTATCAAAGACAACAAGAGCTTGAAGAGGCTCCCGGAGCACGATGATGAGTCCTTCACCAACATAGCCAAGAGAAAAAGAAGCAGCAGCAGCAGCAGCACTGACTTTGATCATAGTGATACTATTAACAACCACCTTTGGTTTCAGCCTGGTGTTGATACTTCTTCTTCACTTGTTTCCTTCTCCACAGAGGAAGAGAGGGTTTGTTTTGTTCCTTCTGAAGTGGTGTCTCATCACCCTTGGCTGGAATCATGCGTCACGAAGATCACCAATTTCGGCGAGGGCAGCCACCGTCCTCTTCTTCATCCAAAAGAAGGTTCAGTCTCCAACGCTTCCTCGGAGAGCCACCACAGCCTCAGGCTAAACGACACCGTATCGGAACACGAAGTGGGAAACGGTTCGGGGAACCCTTACCACCACCACGAAGCAGAGGCAGGGGAAGAAGATAACCACCACGGATTCGAACTCGTTAGCCTCCTCACCGGCTGCGTCGACGCCATCGGATCCAGAAACGTCGCCGCAATCAGCCACTTCATAGCGAAGCTCGGCGATCTAGCTTCTCCGAGAGGAACAACTTCCATAAGCCGCATTTGCGCTTACTTCACAGAAGCCTTGGCCATCAGAGTCACCAGGCTCTGGCCTCAGTGTTTTCACATCACCGCCGCCACTTCTCGCGACATGGTGGACGACGACGAATCCGCCACCGCTCTGCGACTTCTCAACCAAGTAACCCCAATTCCGAAGTTCCTTCACTTCACATCAAACGAGATGCTGCTGAGAGCCTTCGAAGGCAAAGACAGGGTTCACATAATCGACTTCGACATCAAGCAAGGTCTCCAATGGCCATGCCTGTTCCAAAGCCTAGCTTCCAGGTCAAACCCTCCGAGTCACGTGCGAATCACGGGGATCGGCGAGTCGAAACAGGATCTAAACGAAACCGGAGACAGACTCGCGGGTTTCGCTGAAGCTTTGAATCTCCCCTTCGAGTTCCATCCTGTTGTGGACAGGCTCGAGGACGTGAGGCTCTGGATGCTGCACGTGAAGGAGCACGAAACGGTGGCCGTGAACTGCGTTTTGCAGCTTCACAAAACTCTCCACGACCTAACCGGAGGAGCCTTGAGGGACTTTTTGAATCTCATCCGCAGCACGAACCCTACAATCCTCGTGGTGGCGGAGCAGGAGGCGGAGCACAACGAAACGAGGTTGGAGGCGAGGGTGTGCAACTCGTTGAAATATTACTCAGCGTTGTTTGACTCTATCGACGAGTGTGGGCTTGCGCAAGAGAGTGTTGTGAGGGCGAAGATAGAGGAGATGTACGCTAAGGAGATTAGAAACATTGTGGCTTGCGAAGGGAGGGAGAGAGTGGAGAGGCACGAGAGTTTCGCCAAGTGGAGGAGGATGATGGTGGAGCAAGGTGGGTTCAGGTGCATGGGTGTTAGCGAGAGAGAAATTAACCAGAGCCAGTTGCTGTTGAAGATGTATGATAATAGTTCTTCTTGTGAGGAGAGTTGTTACTACAGTGTCAAGAAACAAGAGAAGGAAGGAGCAACGGGAGTTACGCTTAGTTGGTTGGAGCAACCTTTGTACACTGTCTCTGCTTGGGGGTCTGAGCCTGGGCCTGGGCCTGTTGATGTCGCGGGAACCTCCTCCTCTTTTTCTCAGCCAAGTTAG 1986 0.5267 MLAGCSSSTLLSPRHRLRSEAPVAQFQACHFQLPSSMSTQRLDLPSCTTFSSRSSKDTTTTSSRSVGISVEKPIEARTSTCSLKQHIRLPPLAITAAPAPLLEQESIKDNKSLKRLPEHDDESFTNIAKRKRSSSSSSTDFDHSDTINNHLWFQPGVDTSSSLVSFSTEEERVCFVPSEVVSHHPWLESCVTKITNFGEGSHRPLLHPKEGSVSNASSESHHSLRLNDTVSEHEVGNGSGNPYHHHEAEAGEEDNHHGFELVSLLTGCVDAIGSRNVAAISHFIAKLGDLASPRGTTSISRICAYFTEALAIRVTRLWPQCFHITAATSRDMVDDDESATALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPCLFQSLASRSNPPSHVRITGIGESKQDLNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLHDLTGGALRDFLNLIRSTNPTILVVAEQEAEHNETRLEARVCNSLKYYSALFDSIDECGLAQESVVRAKIEEMYAKEIRNIVACEGRERVERHESFAKWRRMMVEQGGFRCMGVSEREINQSQLLLKMYDNSSSCEESCYYSVKKQEKEGATGVTLSWLEQPLYTVSAWGSEPGPGPVDVAGTSSSFSQPS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1327 661 MobiDBLite consensus disorder prediction 109 128 - -
Aed6g1327 661 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 644 IPR005202 -
Aed6g1327 661 Pfam GRAS domain family 261 639 IPR005202 -
Aed6g1327 661 ProSiteProfiles GRAS family profile. 252 640 IPR005202 -
Aed6g1327 661 MobiDBLite consensus disorder prediction 47 66 - -
Aed6g1327 661 PANTHER SCARECROW-LIKE PROTEIN 28 6 644 IPR030027 -
Aed6g1327 661 MobiDBLite consensus disorder prediction 109 142 - -
Aed6g1327 661 MobiDBLite consensus disorder prediction 201 225 - -
Aed6g1327 661 MobiDBLite consensus disorder prediction 211 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1327 Aed-Chr6 17994065 17996050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1327 1 639 GRAS Transcription Factor Family AT1G63100 54.559 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed6g1327 GRAS 7.9e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1327 - - gmx:100786173 996.497