Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1317 ATGCCCAAGATGAAGCACCTTCTGAGAAAGCTTCACATAGGTGGTGGGGCTGCCACCATCAACCAGAGTCACAGTCACAATCACGACGCATTGCCGTCGCACGCTCTCGCTCACAATCACACTCCCTCCACTTCCACGCTCCCTTCGCCCACCGTCGTGTCGGATCCGAGCCCCGTCGTCGAAGCCCAAAACGACGTCGTCGATTTCAATTTGTTGCAGGAGGAGGAGTTTCAGATGCAACTCGCGCTCGCAATCAGCGCCTCCGATTCCGATCGCCGCGACAACGCCGAATCGGCGCAGATCGACGCCGCCAAACAGATCAGCCTCGGTTACTCTGCTTCGCTCACTGACACTGAAGCCCTAGTTCAGTTTCAATCCCTTCGATATTGGAACTACAATGTGATTAGTTACGATGAGAAAGTGATGGATGGGTTTTATGATGTTTATGGGGTTACCTCGAATTTGGTTGGGCGGGGGAAGATGCCATTGTTGGTGGATTTGCAGACGGCTCCTGTCTCGGGTGATGTTGGTTGTGAGGTGATTTTGGTGAACCATGTGGTTGATCTTGAGCTCAATCAGCTTGAGAGGAAGGCGTGTAGTTTGGTCGAGGAGCGTTGTGTTTCTGGACTGGGACTGATTTTGAGTGGCTTGCTTCAGAAGCTTGCTGATGTTGTTGTTAATAGAATGGGTGGACCGGTTGTTAATGCTGAGAAACTTACAAAGAAGTGGGCTATGAGGAGTCGTGAGTTACGGGATTCTATGCAAACTATTGTCCTTCCCCTTGGCCTTCTTGATATCGGACTTTCACGTCACCGAGCCCTACTTTTTAAGGTACTTGCTGATAGGATTAACATTCCCTGTAAGCTGGTTAAAGGGAGCTATTATACAGGAACTGATGATGGAGCTGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGCGCTCTTATTCCTGCTGAGGTACCCAGCAGCCAGATAAAAAACAACAGTTTTGCTGTTAGGGGTTGTGCAGAGATTGTAGGACTACCAAACAAGACACATTCAATGGTAGATGATGGAACTGGTGTGCTGGGAGTCTTTTCTGATTGTGGTAGATTTTCAACAATGGAGACGGTCCAGACAGAAGAATTATTAGCTATGGGCAGTCACACAAAGTCAGATGAAATAAATCATATTAAAGTAAATGAGACAAGGAGATTTGAACATACAGAAGCATATGAATGCTCATCACATCCAAAACCATCACCTGCAGAGAATATGCGTGTAAAAAATGTCTCTAAGTATGTTCTCAGTGCAGCAAAGGACCCAGAATTTGCCCAAAAACTGCATAATGTTCTAGTAGAGAGTGGTGCCTTACCTCCTCCTGATCTTTTTTCAGATATAAATCCCCAAGATAGGGGTGTAGATAAAGTAAGTGAAAACATTTTTGATTCTGTTCAAGCTGACACAAATAGGTTGTTATTAAGCTATGAAAAGTCTCTCATACCCTCACATAGGGTGGGCTCTGCCAGCGATAGGAAGTTATGTCAATCAGCTGATTGGTTAGCTGAACAGCAAAAAGAATTGCATACAGATGTTGAATTTTACAATTTTTCACTGGGTGATACAAGGATTGGGTTTGTAAATGTTTCTGATAGAGATAATGACAGAGAGAAATCTAATGCAATAAATGCTGATTTGGCTTCTATTCATTCACATAAGATTTGCAAAGAAAGGCGTCCTGATTCTTCCTTGCCCAAGGCAGCTCTTTCCTGCAAAATGCATAATGGGGTTGACTGTTTTTGTGAAGATGATGAAAATGGTTCTCAAAACAATGTTGAAGCTTCTATTAATAGCAATGAATTTGGGAAAGATTCAGCTGTTCAAATAAATGAGATGGGGGTCATTGGAGATTGTTATGATGGTAGAAAGAACGAAGTTAACCAAGTTCTTGGTGAAGGCTCGGAATGGGAAATTCAATGGGAGGATCTTGAAATTGGTGAGCGTATTGGTATTGGTTCTTATGGTGAAGTTTATCGTGCTGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTGGACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGGCTGCGGCATCCTAATGTCGTGCTCTTCATGGGAGCTATTACTCGCCCCCCCACATTTCTCTATCTTGACAGAGTTTCTTCCAAGGTTAATTTTGTTGTATGCATTAAAGGAAGTTTATATAGACTATTGCATCGTCCCAATCTTCGACTTGATGAGAAGAAACGGTTGCGCATGGCTCTAGATGTGGTTTGTGATTTTGGTCTGTCACGAACGAAGCACCATACATATTTGTCATCCAAATCATGTGCTGGAACGCCTGAGTGGATGGCGCCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGATGTGTATAGCTTTGGTGTGATCTTGTGGGAGTTGACTACCGCAAGAATTCCCTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAATAAACGGCTTGAAATTCCAGAAGATGTCAATCCAGTAGTAGCACAGATAATACGTGATTGCTGGCAAATGGAGCCACACTTGCGGCCATCATTCACACAACTGATGTCTCGCCTTTACCGTCTTGAACATTTGATTGTCCCCAAAACGGTCTCAAGCTCAACACATTAA 2733 0.438 MPKMKHLLRKLHIGGGAATINQSHSHNHDALPSHALAHNHTPSTSTLPSPTVVSDPSPVVEAQNDVVDFNLLQEEEFQMQLALAISASDSDRRDNAESAQIDAAKQISLGYSASLTDTEALVQFQSLRYWNYNVISYDEKVMDGFYDVYGVTSNLVGRGKMPLLVDLQTAPVSGDVGCEVILVNHVVDLELNQLERKACSLVEERCVSGLGLILSGLLQKLADVVVNRMGGPVVNAEKLTKKWAMRSRELRDSMQTIVLPLGLLDIGLSRHRALLFKVLADRINIPCKLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGALIPAEVPSSQIKNNSFAVRGCAEIVGLPNKTHSMVDDGTGVLGVFSDCGRFSTMETVQTEELLAMGSHTKSDEINHIKVNETRRFEHTEAYECSSHPKPSPAENMRVKNVSKYVLSAAKDPEFAQKLHNVLVESGALPPPDLFSDINPQDRGVDKVSENIFDSVQADTNRLLLSYEKSLIPSHRVGSASDRKLCQSADWLAEQQKELHTDVEFYNFSLGDTRIGFVNVSDRDNDREKSNAINADLASIHSHKICKERRPDSSLPKAALSCKMHNGVDCFCEDDENGSQNNVEASINSNEFGKDSAVQINEMGVIGDCYDGRKNEVNQVLGEGSEWEIQWEDLEIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPTFLYLDRVSSKVNFVVCIKGSLYRLLHRPNLRLDEKKRLRMALDVVCDFGLSRTKHHTYLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTARIPWKGLNPMQVVGAVGFQNKRLEIPEDVNPVVAQIIRDCWQMEPHLRPSFTQLMSRLYRLEHLIVPKTVSSSTH 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1317 910 CDD STKc_MAP3K-like 672 893 - -
Aed6g1317 910 MobiDBLite consensus disorder prediction 37 56 - -
Aed6g1317 910 Pfam Ethylene-responsive protein kinase Le-CTR1 123 326 - -
Aed6g1317 910 PANTHER SERINE-THREONINE PROTEIN KINASE 62 779 - -
Aed6g1317 910 MobiDBLite consensus disorder prediction 18 56 - -
Aed6g1317 910 Pfam Protein tyrosine and serine/threonine kinase 666 779 IPR001245 GO:0004672|GO:0006468
Aed6g1317 910 Pfam Protein tyrosine and serine/threonine kinase 780 893 IPR001245 GO:0004672|GO:0006468
Aed6g1317 910 PANTHER SERINE-THREONINE PROTEIN KINASE 780 906 - -
Aed6g1317 910 SUPERFAMILY Protein kinase-like (PK-like) 657 901 IPR011009 -
Aed6g1317 910 Gene3D Transferase(Phosphotransferase) domain 1 751 902 - -
Aed6g1317 910 ProSiteProfiles Protein kinase domain profile. 666 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1317 910 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Aed6g1317 910 Gene3D Phosphorylase Kinase; domain 1 654 740 - -
Aed6g1317 910 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 780 906 - -
Aed6g1317 910 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 62 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1317 Aed-Chr6 17914996 17923512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1317 625 908 MAP Kinase Kinase Kinase AT5G11850 64.375 1.31e-132 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aed6g1317 EDR1 9.2e-71 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1317 K04424 - gmx:100779137 1525.38