Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1300 ATGGAGAGAATGAGAGTGAAGGAGGAAGAAGAAGCAGTGACATGGGAATTTGCAAACGAAGGGTTTTTGGCAGGACAAAGGCACTTACTGAAGACCATAAAGAGAAGAAGAAATGTGTCACAGAGTACTATGCAACAAAGAGGAAAAAGTGGAGTTTGTGTTGAAGTGGGTGGGTTTGGACTAGAGGGTGAGTTAGAGAGGTTGAAGAGAGACAGAAACATTTTGATGGCAGAAATTGTGAGGTTGAGGCACCAACAGCAGAACTCAAGTGATCAATTGAATGCCATGGAGGCCAGATTGCAAGCCACTGAGAAGAAACAGCAACAAATGATGTCTTTCCTTGCCAAAGCATTAAAAAATCCATCTTTCATGCAACAATTAGCCCACAAGACCCCCCAAAGCAGAGAAGAAGTGTTTGGTGTTGAAATCAATAGGAAGAGGAGACTAACTGCTAGCCCAACTGTGGAAAACTTGCAACAACATGATCAAGATTTGGTAACTATGGGCACTTTTTTCTCCTCACCACCACCTTATGATAATGAACCACCTTATGATAATGAACTTAGTAATGAAATCAAAGAGCTTGCATCTAGTGAGAGTGGTTTTGGTTCAATTGGGGATACATTATTCTTTGAGGACTTTCACAACAAAGACTTGGTTACTTGGAATCCAAGAAATGAAGTTATAATTGGCGATTGTTCCCTAGTTGATGTGCCAGTGGAGGATTTGGTAGCAATCCCTGATGATTGGAGTGAGCAATTGCAGGACCTTGTGGATCACATGGACTATCTAGGATCCAAACCATAG 807 0.4164 MERMRVKEEEEAVTWEFANEGFLAGQRHLLKTIKRRRNVSQSTMQQRGKSGVCVEVGGFGLEGELERLKRDRNILMAEIVRLRHQQQNSSDQLNAMEARLQATEKKQQQMMSFLAKALKNPSFMQQLAHKTPQSREEVFGVEINRKRRLTASPTVENLQQHDQDLVTMGTFFSSPPPYDNEPPYDNELSNEIKELASSESGFGSIGDTLFFEDFHNKDLVTWNPRNEVIIGDCSLVDVPVEDLVAIPDDWSEQLQDLVDHMDYLGSKP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1300 268 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 166 IPR027725 -
Aed6g1300 268 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 14 166 - -
Aed6g1300 268 Coils Coil 65 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1300 Aed-Chr6 17787050 17788808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1300 15 268 HSF AT2G26150 43.820 2.72e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1300 K09419 - gmx:100820298 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1300 6 17787050 17788808 Aed4g1647 4 21096784 21099543 PCT