Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1299 ATGGTGTTCATAGTATTGGAATGGTTATTTCCTTTTCCATCATGTGTAGCCTTGTTCACCACCCTTCTTCTGGCGTTAGTAGGAGGATTGTTGGGCTATCTTTATGGGCCCTATTGGGGGCTTAGGAAAGTTCCAGGCCCACCTTCTCTGCCTCTTGTAGGACACCTTCCCTTACTGGCCAAATATGGCCCTGATGTCTTCTCACTCCTTGCCAAGCAATATGGCCCAATTTACAGATTTCATATGGGAAGGCAACCACTAATCTTGGTAGCAGATCCAGAGCTTTGTAAAGAAGTGGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCTTCTCCAATTTCAGCATCTCCTCTTCACCAAAAAGGTCTCTTCTTTACCAGGGACTCACGTTGGTCAACCATGCGAAACACGATCCTGTCAGTGTACCAGCCATCACACTTGGCTAGCTTAGTGCCAACAATGCAATCATTCATAGAATCCGCAACACAAAATCTTGATGACACCCCAAATGAGGACATAATCTTTTCCAATCTTTCCCTAAGGCTAGCAACCGATGTGATTGGAGAGGCAGCATTTGGTGTCAACTTTGGTCTCTCTAAGCCTCATTCAGTTTGTGAATCAATCAAAAGTGTTAGTGTTAACAATGTGAGAAATGAAGACAATGATGATGAAGTATCAGATTTCATCAATCAACACATTTACTCCACAACACAACTCAAGATGGACTTGTCTGGTTCATTCTCCATCATACTTGGTCTACTTGCACCAATTCTTCAGGAACCGTTTAGACAAATACTAAAGAGAATACCAGGCACAATGGACAGGAAAATAGAGAGTACTAATGAGAAGCTCAGTGGTCCTCTTGATGAGATTGTCAAGAGGAGAATGGAAGACAAGAACAGAACTTCAAAGAATTTCTTGTCACTCATTTTGAATGCGAGAGAATCGAAGACCGTATCAGAGAACGTGTTTTCACCTGATTACATTAGTGCTGTTACTTATGAGCACTTACTTGCTGGATCAGCTACAACAGCCTTTACCTTGTCATCAATTGTCTATTTGGTTGCTGGACACCAAGAGGTTGAGAAAAAGTTGCTTCATGAGATTGATGGATTTGGTCCAACTGATAGGATTCCAACAGCTCAAGATCTTCATGATTGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTGGTTGCAAGAGAAACATCAAATGAGGTGGAGATAGGAGGTTACCTTCTTCCAAAGGGGACGTGGGTATGGTTAGCTCTAGGAGTTCTAGCAAAAGATCCAAAGAATTTTCCAGAGCCCGAGAAGTTCAAACCAGAGAGGTTTGATCCCAAATGTGAAGAAATGAAACGAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCCCGGGCATGTATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTACTCTCATTCATTTGTACCGAAAATATGTGTTTCGTCACTCACTTGACATGGAAAAACCTGTAGAAATGGAATATGGTATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGAGTCATAAGAAGAACAAAATAG 1617 0.415 MVFIVLEWLFPFPSCVALFTTLLLALVGGLLGYLYGPYWGLRKVPGPPSLPLVGHLPLLAKYGPDVFSLLAKQYGPIYRFHMGRQPLILVADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDDTPNEDIIFSNLSLRLATDVIGEAAFGVNFGLSKPHSVCESIKSVSVNNVRNEDNDDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPILQEPFRQILKRIPGTMDRKIESTNEKLSGPLDEIVKRRMEDKNRTSKNFLSLILNARESKTVSENVFSPDYISAVTYEHLLAGSATTAFTLSSIVYLVAGHQEVEKKLLHEIDGFGPTDRIPTAQDLHDCFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYRKYVFRHSLDMEKPVEMEYGMVLNFKHGVKLRVIRRTK 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1299 538 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 Gene3D Cytochrome P450 35 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PANTHER THROMBOXANE-A SYNTHASE 14 537 - -
Aed6g1299 538 Pfam Cytochrome P450 45 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 537 - -
Aed6g1299 538 SUPERFAMILY Cytochrome P450 38 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Aed6g1299 538 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g1299 538 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1299 Aed-Chr6 17776741 17781490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1299 82 536 Cytochrome P450 AT2G26170 73.626 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1299 K20771 - gmx:100805689 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1299 6 17776741 17781490 Aed4g1648 4 21103477 21107509 PCT