Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1298 ATGGGTGCTTCTGGAAAATGGGTCAAAGCGTTAATCGGACTCAGCAACAAGAATGACCTCGATGGGAAGAAGAAGAAGAATAAGTGGAGGCTGTGGAAGAGTTCTTCAGCAGGAGAAAACAGATCTCAGGATTATGACTATTCTAGCGTGGCTTCGGATTCTTTCAATGCTGCAGTGGCCACTGTTGTCAGAGCTCCACCTAAGGATTTCAAACTCCTCAAACAAGAATGGGCTGCCACCAGAATCCAATCCTCTTTCCGTGCCTTCTTGGCAAGAAGGGCATTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTGCGAGGTAGGCTGGTGAGGAAGCAGGCTGCGGTCACATTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCGCGAGTGAGAGCTCGGCATGAAGGGTGGTGTGATAGCAAAGGATCATTGAAAGATGTCAAGACAAAATTACAGATGAGGCAAGAAGGAGCTTTCAAGAGGGAGAGAGCAATTGCATACTCTCTTGCTCACAAGCAATGGAGATCAACCCCCATTTCTAATTCAAGAGCAAACATCTCTCTCAACAATCATGAGATGGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCGAAGCCATGGGAGAGTAGATTAATGGAAGAACAAACTCATCATGCTAATGCCACAGAGAAGACCCCTCCACCAAAGAAATGTGTTGACTCCTCAAATTCAAAAACATCAGAACCATGCAATGTCAAAGTCAGAAAGAACAATGTCAGCACAAGGATTTCTGCCAGACCTCCTCATATTGGGCAAGCTACTCGTTCGCCCTCGAGTCCAAGTTCCGAGTTTCACTATGATGAGAGCTCTAATTCATCCTCAATATGCACATCAACAACACCAATATCTGCATTGCCTTGTGACAGGACAGAGGATAGTAACAACAACACTAGGCCTAGTTACATGAACCTCACTGAGTCAACCAAGGCGAAGAAGAAAACTGGCAATCATCAATACAATAGATCTCAGAGGCAGCAGTCCATGGATGACTTCCAGTTTCTCAAAAGGACAGCAGTTTTCACTAATGGGGATTCCAAAAGCATTGATGCTTCTGACCCTTCAACCAACTTTTCTAGGCCACTTTACCTACCAACCTACATGGATAAGAGGCGGCAACAGTGA 1188 0.4655 MGASGKWVKALIGLSNKNDLDGKKKKNKWRLWKSSSAGENRSQDYDYSSVASDSFNAAVATVVRAPPKDFKLLKQEWAATRIQSSFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARHEGWCDSKGSLKDVKTKLQMRQEGAFKRERAIAYSLAHKQWRSTPISNSRANISLNNHEMDKANWGWSWLERWMAAKPWESRLMEEQTHHANATEKTPPPKKCVDSSNSKTSEPCNVKVRKNNVSTRISARPPHIGQATRSPSSPSSEFHYDESSNSSSICTSTTPISALPCDRTEDSNNNTRPSYMNLTESTKAKKKTGNHQYNRSQRQQSMDDFQFLKRTAVFTNGDSKSIDASDPSTNFSRPLYLPTYMDKRRQQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1298 395 MobiDBLite consensus disorder prediction 238 331 - -
Aed6g1298 395 MobiDBLite consensus disorder prediction 365 383 - -
Aed6g1298 395 SMART iq_5 74 96 IPR000048 GO:0005515
Aed6g1298 395 SMART iq_5 97 118 IPR000048 GO:0005515
Aed6g1298 395 MobiDBLite consensus disorder prediction 365 395 - -
Aed6g1298 395 ProSiteProfiles IQ motif profile. 99 126 IPR000048 GO:0005515
Aed6g1298 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 117 IPR027417 -
Aed6g1298 395 ProSiteProfiles IQ motif profile. 75 103 IPR000048 GO:0005515
Aed6g1298 395 PANTHER IQ-DOMAIN 5-RELATED 141 392 - -
Aed6g1298 395 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 138 - -
Aed6g1298 395 PANTHER IQ-DOMAIN 5-RELATED 1 138 - -
Aed6g1298 395 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 141 392 - -
Aed6g1298 395 MobiDBLite consensus disorder prediction 223 352 - -
Aed6g1298 395 Pfam IQ calmodulin-binding motif 77 96 IPR000048 GO:0005515
Aed6g1298 395 Pfam IQ calmodulin-binding motif 99 116 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1298 Aed-Chr6 17774777 17777396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1298 1 393 IQD Protein Family AT2G26180 51.481 5.63e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1298 - - gmx:100787102 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1298 6 17774777 17777396 Aed4g1649 4 21107997 21109738 PCT