Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1289 ATGACTCTGCGCCACGGTTCCAAAGTTTGGCTCGAGGACCGCGATTCGGCTTGGCTCGCCGCCGAAGTACTCGATTCCGAAGGTAGCCGCCTCTTGCTCGTCACTGATTCCGGCAAAAAGGTTTATGTTTCGCCGGAGAAGCTGTTTCCGAGAGATGCGGATGAAGAGGAGCATGGAGGATTCGAAGATATGACGCGGTTGGCGTACTTGAACGAGCCGGGAGTGCTGTTCAATCTTCGGAGGAGATATGCGCTCAATGATATCTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCCTTCACGAAGCTTCCTCATTTATATGATTCCCATATGATGGAGCAATATAAGGGAGCTCCATTGGGTGAGCTTAGCCCACATGTTTTTGCTGTTGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGCCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGAAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGACGAGCTGCTGGTGATGATAGAACAGTTGAACAGCAAGTCCTTGAATCCAATCCACTCTTAGAGGCATTTGGTAATGCAAGAACTGTTAGGAATGACAATTCAAGCCGTTTTGGGAAATTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCCGGTGCTGCAATTAGAACTTACTTACTGGAAAGATCACGAGTAGTGCAGATAACGGATCCAGAGAGAAATTATCACTGCTTTTATCAGTTGTGTGCATTTGAAAGGGATGCCGAGAAGTATAAGTTAGGACATCCAAGTCACTTCCACTATCTAAATCAAAGTAAAATCTATGAATTAGATGGTGTAAGCAATGCCGAAGAATACCTGAAGACGAGGAGGGCAATGGATGTTGTTGGCATCAGTGACGAGGATCAGGAATCCATATTTCGTGTCTTAGCGGCAATTTTACATTTGGGGAACATTGAATTTTCTCCTGGAATAGAGCATGACTCGTCGGTAGTGAAGGATGAAAAATCCAGATTTCATATGCAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACCTACTGCTGGCAACATTGTGTACTCGTTCAATACAAACTCATGAAGGGAGTATTGTCAAGGCCCTTGATTGCAATGCTGCTCTTGCTGGCCGTGATGCTTTGGCAAAAACTGTTTACGCTCGTTTATTTGATTGGCTTGTCGATAAGATCAATAGATCTGTTGGGCAAGACATCAATTCCAAGATACAGATTGGAGTTTTGGATATTTATGGTTTTGAATGCTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAACGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTATGGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGATAACCAAGATGTTCTAGATTTAATTGAAAAGAAACCCATTGGTATCATTGCTTTTATGTTTCCAAAATCGACGCATGAAACATTCTCAACCAAGTTGTTTCAGCATTTCCGCTCCCACCCTAGGTTGGGAAGGGAAAAATTTTCACAAACTGATTTTGCCGTTTCTCATTATGCAGGAAAGCAACAACTTCAAGCACTAATGGAGACCCTAAACTCGACAGAGCCTCATTACATACGATGTGTGAAACCAAATTCTTTGAATCGACCACAACTATTTGAAAATGCAAGCGTCATACACCAGTTACGCTGTGGGGGTGTCCTTGAAGCTGTTCGGATAAGTCTGGCTGGTTATCCCACTCGAAGAACTTACTCAGAGTTTGTAGATCGCTTTGGGTTAATAGCCCCTGAATTTATGGATGGAAGTTATGATGATAAAGCAGCAACTGAGAAAATTTTGCAAAAGCTCCAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGCCAAATTGGTATTTTGGACTCAAGACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATTCAGCGCCGACTGAGGACATTTATTGCACACAGGGATTTCATCTTAGCCAGAGCTGCTGCATTTTCTCTTCAGGCATGCTGCAGGGGATACATTTCCCGAAAGATATATGCTGCTAAAAGGGAGACAGCAGCAGCTATCTCTATTCAGAAATATATTCGTATGTGGCTTAGGAGGCATGCTTACTTCAAACTGTATTTTTCTGCTATTATCATACAATCCCATGTTCGAGGTTTTGTGACTCGCCAAAGATTATTACATGGAAAGGAACATAGAGCTGCTACTTTTATTCAGGCCTGTTGGAGGATGTCCAAGGTTAGGTCATCTTTCCGGCGACATAAAGCTTCAATTGTGGCAATACAATGTCTTTGGCGGTGTAGACAGGCAAAAAGAGAGTTACGTAGACTTAAACAAGAGGCAAATGAAACTGGTGCCCTCCGTTTAGCTAAGAATAAACTGGAGAAGCAATTGGAAGAGCTCACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCATTGGATGCATTTGTAAAGAAGTATGCAATCTTAGAGCTCGAGCTTATGAATGCTCAAAAAGGCCGGAGTGAAACCATGGAGAAACTGAGAGAGTTCGAACAGAAGTGTTCTCAACTTGAGCAAACTGTGAAAAGGCTTGAGGAAAAGGTATTGAGTTTAGAGGATGAAAATCATGTTCTTCGTCAGAAAGCCTTAAGTACCCCTCTTAAGAGTAAACGTCCAGGTTTTGCCAAGTCAATATCAAAACACTCAAGTGCAATCACTTCCCGCACTGAACGAAAGACCATATATGAGTCACCCACGCCGACAAAACTTATTGCCACTTTTACAGGCTTGTCAGACTCTCGTCAATCTAAGTTAACAGCAGAGAGGCAGCAGGTTAGGGAGGATGACATCATCCTACCATATTGGCTGTCCAATACCTCTGCGCTTCTATGCCTTTTACAGAGGAACTTACGTTCAAATGGCTTTTTAACTACCACTGCTCAACGCTATCTTGGATCACCTGGTTTGACCAGCCGGACTGTGCATGGACCAAAATCTCCATTAAAGTTTATTGGATATGATGATGGTGTATTGCATGTGGAGGCGAGATATCCAGCTATACTTTTTAAGCAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGTCTTCTTCGTGACAATTTGAAAAAGGAGCTTTCTCCATTTCTGGGATCATGTATTCAGGCACCCAAAACAGGACGAGGAGTGCATGGGGGAAAATCATCTAGATCTCCTGGTGGGATTCCCCAACAATCATCTGGTGGTCCATGGAGTAACATTGTCAATTTTTTGGATTCACTCATGAGCAAACTTCGTGTAAATCATGTGCCATCCTTCTTCATCCGTAAGTTAGTTACCCAGGTGTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTTTTGCGTCGGGAATGTTGCACTTTCTCAAATGGTGAATATGTGAAGTCTGGTCTAGCAGAACTGGAGAAATGGATAGTCAATGCAACGGAGGAGTATGCAGGGACATCCTGGCATGAGCTGAATTATATACGACAAGCTATTGGATTCTTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAGATTCGGAAAGATCTTTGTCCGGTATTGACTGTGAGGCAAATCTATCGAATCAGCACTATGTACTGGGATGACAAGTATGGAACCCAAATTAGTGAAATGAGAGAAATTCTCAGCAAGGACACTCAGAATCTGGCCTCAAATTCTTTCTTATTGGATGATGATCTGAGCATTCCTTTCTCTGCTGAAGACATAGATATGGCAATTCCTGCCATAGACCTTGATGAAATTGATCTTCCAGATTTTGTGTCCGAATATTCTTGCGCTCAGTTTCTTAGTTCACATCAGAACAAGCAGCAATCTTGGTTGTCATCTGATTTATTGTTACATTGTGTACGTGCTGATCATGATATCAAAGATAGAAGAGTGCTTCTCTTGGTTGATTGGTATGCAATACAATTCGGGCAATCCAGCAACTTGCGCCTACCACTAGATTTGATTGAAACAAATTGTCAAAGGCGATTTGTGATGGACAGTTTTGATGTTGTAAAGAAAATAAAAGTGACGAGCCTATCATCCATGGAGAAACTCCAAAAAACTTGA 4197 0.4155 MTLRHGSKVWLEDRDSAWLAAEVLDSEGSRLLLVTDSGKKVYVSPEKLFPRDADEEEHGGFEDMTRLAYLNEPGVLFNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDSHMMEQYKGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCAFERDAEKYKLGHPSHFHYLNQSKIYELDGVSNAEEYLKTRRAMDVVGISDEDQESIFRVLAAILHLGNIEFSPGIEHDSSVVKDEKSRFHMQMAADLFMCDVDLLLATLCTRSIQTHEGSIVKALDCNAALAGRDALAKTVYARLFDWLVDKINRSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKKPIGIIAFMFPKSTHETFSTKLFQHFRSHPRLGREKFSQTDFAVSHYAGKQQLQALMETLNSTEPHYIRCVKPNSLNRPQLFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDKAATEKILQKLQLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFIAHRDFILARAAAFSLQACCRGYISRKIYAAKRETAAAISIQKYIRMWLRRHAYFKLYFSAIIIQSHVRGFVTRQRLLHGKEHRAATFIQACWRMSKVRSSFRRHKASIVAIQCLWRCRQAKRELRRLKQEANETGALRLAKNKLEKQLEELTWRLHLEKKIRVSLDAFVKKYAILELELMNAQKGRSETMEKLREFEQKCSQLEQTVKRLEEKVLSLEDENHVLRQKALSTPLKSKRPGFAKSISKHSSAITSRTERKTIYESPTPTKLIATFTGLSDSRQSKLTAERQQVREDDIILPYWLSNTSALLCLLQRNLRSNGFLTTTAQRYLGSPGLTSRTVHGPKSPLKFIGYDDGVLHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPFLGSCIQAPKTGRGVHGGKSSRSPGGIPQQSSGGPWSNIVNFLDSLMSKLRVNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNATEEYAGTSWHELNYIRQAIGFLVIHQKRKKSLEEIRKDLCPVLTVRQIYRISTMYWDDKYGTQISEMREILSKDTQNLASNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIDLPDFVSEYSCAQFLSSHQNKQQSWLSSDLLLHCVRADHDIKDRRVLLLVDWYAIQFGQSSNLRLPLDLIETNCQRRFVMDSFDVVKKIKVTSLSSMEKLQKT 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1289 1398 Coils Coil 801 821 - -
Aed6g1289 1398 Coils Coil 825 845 - -
Aed6g1289 1398 Coils Coil 863 911 - -
Aed6g1289 1398 PANTHER MYOSIN 847 973 - -
Aed6g1289 1398 CDD MYSc_Myo11 73 654 IPR036018 -
Aed6g1289 1398 ProSiteProfiles IQ motif profile. 743 769 IPR000048 GO:0005515
Aed6g1289 1398 Pfam Myosin head (motor domain) 62 544 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 Gene3D Myosin VI head, motor domain, U50 subdomain 308 418 - -
Aed6g1289 1398 ProSiteProfiles IQ motif profile. 788 817 IPR000048 GO:0005515
Aed6g1289 1398 SMART MYSc_2a 53 667 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 ProSiteProfiles IQ motif profile. 692 721 IPR000048 GO:0005515
Aed6g1289 1398 Gene3D - 719 765 - -
Aed6g1289 1398 Gene3D - 668 718 - -
Aed6g1289 1398 Gene3D - 766 816 - -
Aed6g1289 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 715 IPR027417 -
Aed6g1289 1398 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 ProSiteProfiles Dilute domain profile. 978 1258 IPR002710 -
Aed6g1289 1398 Gene3D - 249 306 - -
Aed6g1289 1398 ProSiteProfiles Myosin motor domain profile. 545 666 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 PANTHER PROTEIN OPAQUE1-LIKE 847 973 - -
Aed6g1289 1398 PANTHER PROTEIN OPAQUE1-LIKE 4 544 - -
Aed6g1289 1398 PANTHER PROTEIN OPAQUE1-LIKE 544 849 - -
Aed6g1289 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 716 762 IPR027417 -
Aed6g1289 1398 ProSiteProfiles IQ motif profile. 765 794 IPR000048 GO:0005515
Aed6g1289 1398 SMART DIL_2 1139 1246 IPR002710 -
Aed6g1289 1398 MobiDBLite consensus disorder prediction 1088 1110 - -
Aed6g1289 1398 ProSiteProfiles Myosin motor domain profile. 59 544 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 Pfam IQ calmodulin-binding motif 693 712 IPR000048 GO:0005515
Aed6g1289 1398 Pfam IQ calmodulin-binding motif 743 760 IPR000048 GO:0005515
Aed6g1289 1398 Pfam IQ calmodulin-binding motif 766 786 IPR000048 GO:0005515
Aed6g1289 1398 Pfam IQ calmodulin-binding motif 718 737 IPR000048 GO:0005515
Aed6g1289 1398 Gene3D Kinesin motor domain 62 434 IPR036961 -
Aed6g1289 1398 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g1289 1398 PANTHER PROTEIN OPAQUE1-LIKE 976 1313 - -
Aed6g1289 1398 Gene3D - 601 667 - -
Aed6g1289 1398 SMART iq_5 739 761 IPR000048 GO:0005515
Aed6g1289 1398 SMART iq_5 668 690 IPR000048 GO:0005515
Aed6g1289 1398 SMART iq_5 764 786 IPR000048 GO:0005515
Aed6g1289 1398 SMART iq_5 716 738 IPR000048 GO:0005515
Aed6g1289 1398 SMART iq_5 691 713 IPR000048 GO:0005515
Aed6g1289 1398 SMART iq_5 787 809 IPR000048 GO:0005515
Aed6g1289 1398 Pfam DIL domain 1140 1243 IPR002710 -
Aed6g1289 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 765 820 IPR027417 -
Aed6g1289 1398 PANTHER MYOSIN 976 1313 - -
Aed6g1289 1398 PANTHER MYOSIN 4 544 - -
Aed6g1289 1398 PANTHER MYOSIN 544 849 - -
Aed6g1289 1398 ProSiteProfiles IQ motif profile. 717 741 IPR000048 GO:0005515
Aed6g1289 1398 Gene3D - 435 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1289 Aed-Chr6 17663892 17692159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1289 1 1310 Myosins gene family AT4G33200 61.395 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1289 K10357 - gmx:100796413 1982.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1289 6 17663892 17692159 Aed6g1289 6 17663892 17692159 ECH
Aed6g1289 6 17663892 17692159 Aed4g1689 4 21360098 21381685 PCT