Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1272 ATGACAGACAAACATCCAAAACTACCACCAGCAGATACACCTGACAGTGATGAATTCACCAACCAGTGGTCTTTTGAGTTCTCTGATTACTTGAAATTCGATGATAATCAGTGGATGCATGATGATCTCCAGTCGTTTGCTTCTGAGAATGTCTCAAACCAGGCTCATCAAGCAAGTAATGTAGGTGAGTTTGGAGGAGGAAGTAGCCACTTTGAAGGGTCTTCTAGCAATGATGCTGGTGTATTTGATTACAGGAATTACTATCGGTGTTCAGTGGATGGTTGCAATGTGAAAAAGAGAGTGGAAAGAGACAAGGATGACCCAAGGTATGTAATAACAACCTACGACGGGAACCACACTCATCCAAGTTCTTCCTAG 378 0.4259 MTDKHPKLPPADTPDSDEFTNQWSFEFSDYLKFDDNQWMHDDLQSFASENVSNQAHQASNVGEFGGGSSHFEGSSSNDAGVFDYRNYYRCSVDGCNVKKRVERDKDDPRYVITTYDGNHTHPSSS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1272 125 SUPERFAMILY WRKY DNA-binding domain 84 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1272 125 MobiDBLite consensus disorder prediction 1 20 - -
Aed6g1272 125 Pfam WRKY DNA -binding domain 85 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1272 125 Gene3D WRKY domain 47 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1272 125 MobiDBLite consensus disorder prediction 106 125 - -
Aed6g1272 125 ProSiteProfiles WRKY domain profile. 85 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1272 125 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 84 123 - -
Aed6g1272 125 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 70 - -
Aed6g1272 125 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 84 123 IPR044810 GO:0003700
Aed6g1272 125 SMART WRKY_cls 76 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1272 125 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 70 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1272 Aed-Chr6 17468413 17469531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1272 85 123 WRKY Transcription Factor Family AT5G26170 76.923 2.41e-17 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g1272 WRKY 7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1272 - - gmx:100796836 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1272 6 17468413 17469531 Aed6g1272 6 17468413 17469531 ECH