LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed6g1268	ATGAATTTCTTAGCTCAGCTTCTGAGATTACCACTACCTGAGATGGTAATCACAATTTTTCTTCTCGTGTTGGCTTTTGCTTCTCCACTTAAAACAGCCGAATCACTAAGTTTCAACATAACAAACTTCCACGACTCCGAGAATGCAAAAAACATGCAATACCAAGGTGATGGAAAAGTAAACAAAAACGGTTCCATAGAGCTCAACATAGTGACCTATATTTCCCGCGTTGGAAGAGCCTTTTACGGAGAACCTCTACACCTGTGGGACTCATCTTCTGGTGTTGTAACAAACTTCTCCACGCGCTTCACTTTCACTATTCTCAGAGCCTCCAACGACACCATTGGTGACGGTTTTGCTTTCTACTTAGCCCCTCGTGGCTTCCAGATTCCTCCGAACGCAGTAGGTGGCACTTTAGGCCTCTTCAACGCCACCACCAACACCTATGTTCCCAATAATCACGTGCTCGCGGTTGAGTTTGACACATTTAATGGCACAATTGACCCTCCCTTTCAGCACGTTGGCATAGACGATAACTCTCTCAAATCCGTCGCTGTTGCCGAGTTTGACATTTACAAAAACCTCGGAAAGAAATGTAACGCTTTGATAACCTACACTGCTTCCGGCAAGACCCTCTCTGTGTCTTGGTCCTTCGACGGAACCACAACGCCGAATTCGAAGAACTCTTCACTTTCTTACAAGATTGACCTCATGGACATTCTACCAGAGTGGGTGATTGTTGGCTTCTCTGCTGCGACCGGACAATATACCGAACGAAACGTTATTCACTCATGGGAGTTCAGTTCAACGTTGAATTCGAAGCGCATCAAAAAACACAATGTTTTACAGATTGTTGTGGTAACCTGTGCAGCAGTCTTGGTGGTCGTGGCCGCGAGTGTTGCAGCTTGGGTGATGATCACGAAAAGGAGAAAGGGTAATAAGGTTGGTAATGATAATGATGAAGGTGGAGCCACCACGGTTAAGTTTGATTTGGATAGGGCAACTATACCTAGAAGATTTGAACACAAAGAACTAGTTGCTGCCACCAAAGGGTTCGCGGTTGATGCAAGGCTTGGACGAGGTGGCTCGGGACAGGTTTACAAAGGGGTTCTGAGTCATTTAGGAAGGGTTGTTGCTGTCAAGAGGATTTTCACAAACACTGAAAGTTCAGAGAGAGTTTTCATAAACGAGGTTAGGATCATAAGCCGTCTTATACACAGAAATTTGGTGCAGTTCATAGGGTGGTGCCACGAGGAAGGAGAATTTCTGTTGGTTTTTGAGTTCATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGAAAGAAAAAAACTTTAGCCTGGGATGTTAGGTACAAGGCAGCATTAGGGGTGGCTTTGGCCCTTCGTTATCTTCATGAGGATGCAGAGCAAAGTGTTCTTCATCGGGATATTAAATCAGCTAATGTGTTGTTGGACACAGATTTTAGCACAAAGCTTGGCGATTTTGGGATGGCAAAGTTGGTGGATCCAAGGTTAAGGACTCAAAGAACAGGGGTAGTGGGGACTTACGGGTACCTTGCCCCAGAATATATCAACGAAGGTAGGGCTAGCAAGGAATCAGACATTTATAGTTTTGGAGTTGTGGCTCTTGAAATTGCATGTGGGAGGAGGATTTATCAAGATGGAGAGTTTCATGTGCCTCTTGTGACATGGGTGTGGCAAAAATATGTGGAAGGGAATGTTTTGGATGTTGTTGATGAGAGATTGAAGAAGGAGTTTAACATGGATGAGATGACAAACTTGATTGTTGTGGGGTTGTGGTGTACTAACCCTAACGACAAGGAAAGGCCTAAGACTGCAGAGGTAATAAAAGTTCTTCAGCTTGAAGCGCCATTGCCAGTGCTACCACTTGATATGCATGACGATGATGGTCCTCCTCCTTCTTCAGTTGCCCATGTGAAATCCACTTACAATTCCTCATATTCGTCTTCAAAGAAGCTTCAGTCTTTACAGTTTAGAGCCGTTGAATAA	2010	0.4453	MNFLAQLLRLPLPEMVITIFLLVLAFASPLKTAESLSFNITNFHDSENAKNMQYQGDGKVNKNGSIELNIVTYISRVGRAFYGEPLHLWDSSSGVVTNFSTRFTFTILRASNDTIGDGFAFYLAPRGFQIPPNAVGGTLGLFNATTNTYVPNNHVLAVEFDTFNGTIDPPFQHVGIDDNSLKSVAVAEFDIYKNLGKKCNALITYTASGKTLSVSWSFDGTTTPNSKNSSLSYKIDLMDILPEWVIVGFSAATGQYTERNVIHSWEFSSTLNSKRIKKHNVLQIVVVTCAAVLVVVAASVAAWVMITKRRKGNKVGNDNDEGGATTVKFDLDRATIPRRFEHKELVAATKGFAVDARLGRGGSGQVYKGVLSHLGRVVAVKRIFTNTESSERVFINEVRIISRLIHRNLVQFIGWCHEEGEFLLVFEFMPNGSLDTHLFGKKKTLAWDVRYKAALGVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYINEGRASKESDIYSFGVVALEIACGRRIYQDGEFHVPLVTWVWQKYVEGNVLDVVDERLKKEFNMDEMTNLIVVGLWCTNPNDKERPKTAEVIKVLQLEAPLPVLPLDMHDDDGPPPSSVAHVKSTYNSSYSSSKKLQSLQFRAVE	669

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed6g1268	669	ProSitePatterns	Legume lectins beta-chain signature.	156	162	IPR019825	-
	Aed6g1268	669	Pfam	Protein kinase domain	354	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed6g1268	669	Gene3D	Phosphorylase Kinase; domain 1	337	428	-	-
	Aed6g1268	669	SUPERFAMILY	Protein kinase-like (PK-like)	336	639	IPR011009	-
	Aed6g1268	669	MobiDBLite	consensus disorder prediction	644	661	-	-
	Aed6g1268	669	PANTHER	-	36	633	-	-
	Aed6g1268	669	PANTHER	LECTIN RECEPTOR KINASE	36	633	-	-
	Aed6g1268	669	Pfam	Legume lectin domain	35	278	IPR001220	GO:0030246
	Aed6g1268	669	ProSiteProfiles	Protein kinase domain profile.	352	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed6g1268	669	SUPERFAMILY	Concanavalin A-like lectins/glucanases	34	271	IPR013320	-
	Aed6g1268	669	ProSitePatterns	Legume lectins alpha-chain signature.	241	250	IPR000985	-
	Aed6g1268	669	MobiDBLite	consensus disorder prediction	629	661	-	-
	Aed6g1268	669	Gene3D	Transferase(Phosphotransferase) domain 1	429	631	-	-
	Aed6g1268	669	CDD	lectin_legume_LecRK_Arcelin_ConA	36	271	IPR001220	GO:0030246
	Aed6g1268	669	ProSitePatterns	Protein kinases ATP-binding region signature.	358	381	IPR017441	GO:0005524
	Aed6g1268	669	SMART	serkin_6	352	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed6g1268	669	Gene3D	-	33	286	-	-
	Aed6g1268	669	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	472	484	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed6g1268	Aed-Chr6	17443432	17446927	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed6g1268	20	632	Receptor kinase-like Gene Family	AT5G10530	44.817	4.46e-173	507

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Aed6g1268		Pkinase	1.1e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed6g1268	-		-	gmx:102662919	1075.08