Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1267 ATGTTGGCTACCTCGGAACATTTCCGCTGCTTCAAAACTTGTCTTCTTTTGTGCATCCTTACGATCCTTCTTCCAATAGTTCAACCACTTTCCTTCAACATAACTAACTTTAGCGACCCTGAAACCGCAAGCCTCATTCAATACGCAGGCGTAGCCAAAGGTGAGAACGGAACCATAGTGCTGAATCCACTCATCAACAGTGGAGTTGGGCGAGCCATCTATAGCGAACCTCTGAGTCTGAAGAACTCTTCTGACGAAAATGTCACAGACTTTTCTACTCGTTTCTCATTCACTATCGACTTGCGCAACAAAACTAACTACGGTGATGGCTTTGCCTTCTACATCGCACCCCTTGCCTTTGACTACCAGATTCCCGCGAATTCATCTGGTTTTCGTCTCGGACTATACGGTGACACCCAAAACAACCTCGTTGCTGTCGAATTTGACACTTTTGTAAACGAGTTTGACCCACCCATGCAGCACGTAGGGATCAACAATAACTCAGTGGCATCGCTCGAATATAAGAAGTTTGATATTGAGAACAACATAGGGAAGATGGGGCATGTGTTGATAACTTACAATGCTTCTGCAAAACTCCTCTCTGTCTCGTGGTTCTTCGAGGGAACTAGTTCTGGTTTTACGCCTAACAATTCTCTCTCACACCAGATTGACCTCGGGGAAATTCTACCAAAGTGGGTTACTGCTGGGTTTTCAGGTGCAACCGGGTCTTCCAAAGAGGAAAATGTTATCCATTCCTGGGAATTCAGACCAAATCTTGATCTAAATTTCACGAATCGAGAGGTAAACAGTGAAAATGTCATGATAGTTACCAAATACAAGGTTCAGGTCAAAGTAGTAGCTGTGATTTGTTCTATTATTGTTGTGCTCGTGGTTATTAGTATTACTACTTGGTTGATCATCAAGAAGAGATCAAGAAGCAAAGATGGTTTTGATTTGGATAAAGCGTCTATGCCGAGAAGATATGGTTATAAGGAATTGGTTGCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTCGGAGAAGGAGGCTCTGGACAAGTCTACAAAGGCTTTCTCAGTGACTTAGGGCGCGTGGTTGCGGTGAAGAGAATATTTTCTAATGTTCAAGATTCTGAAAAAATATTCACAAACGAGGTGAAGATTATAAGTCGCCTTATACATAGAAACCTTGTACAATTCATGGGGTGGTGCCACGAGGAAGGAGAGTTACTGCTGGTTTTCGAGTACATGGTTAATGGAAGCCTTGACACTCATATTTTTGGCAACAACAAAAGAACTTTGGCATGGGGTGTGAGATACAAGATAGCATTAGGTGTGGCGAGAGCACTTCGATATCTGCATGAAGACGCGGAGCAGTGTGTTCTTCATAGGGATATTAAGTCGGGTAATGTTTTGTTGGACACAGATTTCAACACTAAGGTCAGTGACTTTGGGATGGCGAAGTTGGTGGACCCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGGACTTATGGCTATTTGGCTCCGGAATATGTGAAAGAAGGAAGGGCTAGCAAAGAATCAGACATGTACAGTTTTGGTGTTTTGGCTTTGGAGATAGCATGTGGAATGAGGACTTACAAGGATGGAGATTATAACCATGTTCCTTTAACCAATTGGGTGTGGAAACAATATGTGGATGGAAATGTTTTGAATGTTGCCGGTAAGGGATTGAAGATGGATTATGATGTGGATGAAATGAGATGCTTGCTCACAGTGGGACTATGGTGTACTCTCCAAGACCACAAGAAAAGGCCAAAGGCAGAACAGGTTATTGATGTTCTTAAGCAAGAAGCGCCATTGCCAAAGCTTTCTACATGA 1863 0.4326 MLATSEHFRCFKTCLLLCILTILLPIVQPLSFNITNFSDPETASLIQYAGVAKGENGTIVLNPLINSGVGRAIYSEPLSLKNSSDENVTDFSTRFSFTIDLRNKTNYGDGFAFYIAPLAFDYQIPANSSGFRLGLYGDTQNNLVAVEFDTFVNEFDPPMQHVGINNNSVASLEYKKFDIENNIGKMGHVLITYNASAKLLSVSWFFEGTSSGFTPNNSLSHQIDLGEILPKWVTAGFSGATGSSKEENVIHSWEFRPNLDLNFTNREVNSENVMIVTKYKVQVKVVAVICSIIVVLVVISITTWLIIKKRSRSKDGFDLDKASMPRRYGYKELVAATNGFADDRRLGEGGSGQVYKGFLSDLGRVVAVKRIFSNVQDSEKIFTNEVKIISRLIHRNLVQFMGWCHEEGELLLVFEYMVNGSLDTHIFGNNKRTLAWGVRYKIALGVARALRYLHEDAEQCVLHRDIKSGNVLLDTDFNTKVSDFGMAKLVDPRLRTQKTKVVGTYGYLAPEYVKEGRASKESDMYSFGVLALEIACGMRTYKDGDYNHVPLTNWVWKQYVDGNVLNVAGKGLKMDYDVDEMRCLLTVGLWCTLQDHKKRPKAEQVIDVLKQEAPLPKLST 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1267 620 Gene3D - 28 283 - -
Aed6g1267 620 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Aed6g1267 620 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Aed6g1267 620 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Aed6g1267 620 Pfam Protein kinase domain 341 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1267 620 Gene3D Transferase(Phosphotransferase) domain 1 417 619 - -
Aed6g1267 620 PANTHER LECTIN RECEPTOR KINASE 29 619 - -
Aed6g1267 620 SMART serkin_6 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1267 620 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1267 620 Pfam Legume lectin domain 30 258 IPR001220 GO:0030246
Aed6g1267 620 CDD lectin_legume_LecRK_Arcelin_ConA 30 259 IPR001220 GO:0030246
Aed6g1267 620 SUPERFAMILY Protein kinase-like (PK-like) 324 608 IPR011009 -
Aed6g1267 620 PANTHER - 29 619 - -
Aed6g1267 620 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 263 IPR013320 -
Aed6g1267 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1267 Aed-Chr6 17440888 17442750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1267 15 620 Receptor kinase-like Gene Family AT5G10530 43.153 1.48e-162 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed6g1267 Pkinase 6.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1267 - - gmx:100801935 1014.99