Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1266 ATGCAATACCAGGGTGATGGCAAAGTAAACAAAAACGGTTCCATAGAGCTCAACATAGTGACTTATATTTCCCGCGTTGGGAGAGCCTTTTATGGAGAACCTTTGCACCTGTGGGACTCATCTTCTGGCGTTGTATCTGATTTCTCCACGCGCTTCACTTTCACTATTTCAAGAGCCTCCAACGACACCATTGGTGACGGTTTTGCTTTCTACTTAGCCCCTCGTGGCTTCCAGATTCCTCCGAACGCAGTAGGTGGCACTTTAGGCCTCTTCAACGCCACCACCAACACCTACGTTCCCAATAATCACGTGCTCGCGGTTGAGTTTGACACATTTAATGGCACAATTGACCCTCCCTTTCAGCACGTTGGCATAGACGATAACTCTCTCAAATCCGTTGCTGTTGCCGAGTTTGACATTTACAAAAACCTCGGAAAGAAATGTAACGCTTTGATAACCTACGCTGCTTCCAACAAGACACTCTTTGTGTCTTGGTCTTTCGAAGGAGCCGCAACGCCGCCGAATTCGAAGAACTCTTCGCTTTCTTACCAGATTGACCTCATTGACATTCTACCCGAGTGGGTGATTGTTGGATTCTCCGCTGCAACTGGACAATATACCGAACGAAACGTTATTCACTCCTGGGAGTTCAGTTCATCGTTGAATTCTTCCGCTGCTTCGAAGCATGGGAAAGAAAAACACAATGTTTTGTTGATTGTTGTGGTGACATGTTCAACGGTTTTGGTGGTCGTGGCCATGAGTGTTGCAGCTTGGGTAATGGTCAGGAAAAAGAAAAAGGGTAAGGTTGATGACGATAATGATGAACCTGGAACCACCTTGGTTAAGTTTGATTTGGATAGGGCAACTTTACCCAGAAGATTTGATTACAAAGAACTAGTTGAAGCTACCAAAGGGTTCGCGGTTGATACTAGGCTTGGACGAGGTGGCTCGGGACAAGTATATAAAGGGGTTCTGAGTTATTTAGGAAGGGTTGTTGCTGTCAAAAGGATTTTCACTAACACTGAAAGTTCAGAGAGAGTTTTCGTAAACGAGGTTAGGATCATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGGAAGGAGAGTTTCTGTTGGTTTTTGAGTTCATGCCTAATGGAAGCCTCGACACCCATCTCTTTGGGGAGAAAAAAACATTGGCTTGGGATATTAGGTACAAGGTAGCGTTAGGGGTGGCTTTGGCCCTTCGTTATCTTCATGAGGATGCGGAGCAAACTGTTCTTCATCGGGATATTAAGTCAGCAAATGTGTTGTTGGACACAGATTTTAGCACCAAGCTTGGTGATTTTGGGATGGCAAAGTTGGTTGATCCAAGGTTGAGGACTCAGAGAACAGGGATAGTGGGGACCTATGGGTACCTTGCCCCAGAATACATCAACGGAGGTAGGGCTAGCAAGGAATCAGACATCTATAGTTTCGGAGTTGTGGCTCTTGAAATTGCATGTGGAAGAAGGATTTATCAAGACAGAGAGTTTCATGTACCTCTTGTGACATGGGTGTGGCAACTATACGTGGAAGGGAACGTTATGGATGTTGTTGATGAGAGAATGAACAATGAGTTTAATGTGGATGAAATAAGAAGCTTGATCATTGTGGGGTTGTGGTGTACTAACCCTAATGACAAGGAAAGGCCAAAGGCTGCAGAGGTAATAAAAGTTCTTCAGCTAGAAGTGCCATTGCCTGTGCTTCCGCTTGACATGCATGACGGTGCTCCTCTAGTTACACAAACGCAGCCCCCTTACAATTCCTCACATTCAGTAGTTGTACCCTTCACTAATAGCTTTGTTAGTGATGGACGCTAA 1860 0.4527 MQYQGDGKVNKNGSIELNIVTYISRVGRAFYGEPLHLWDSSSGVVSDFSTRFTFTISRASNDTIGDGFAFYLAPRGFQIPPNAVGGTLGLFNATTNTYVPNNHVLAVEFDTFNGTIDPPFQHVGIDDNSLKSVAVAEFDIYKNLGKKCNALITYAASNKTLFVSWSFEGAATPPNSKNSSLSYQIDLIDILPEWVIVGFSAATGQYTERNVIHSWEFSSSLNSSAASKHGKEKHNVLLIVVVTCSTVLVVVAMSVAAWVMVRKKKKGKVDDDNDEPGTTLVKFDLDRATLPRRFDYKELVEATKGFAVDTRLGRGGSGQVYKGVLSYLGRVVAVKRIFTNTESSERVFVNEVRIISRLIHRNLVQFVGWCHEEGEFLLVFEFMPNGSLDTHLFGEKKTLAWDIRYKVALGVALALRYLHEDAEQTVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLRTQRTGIVGTYGYLAPEYINGGRASKESDIYSFGVVALEIACGRRIYQDREFHVPLVTWVWQLYVEGNVMDVVDERMNNEFNVDEIRSLIIVGLWCTNPNDKERPKAAEVIKVLQLEVPLPVLPLDMHDGAPLVTQTQPPYNSSHSVVVPFTNSFVSDGR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1266 619 ProSitePatterns Legume lectins beta-chain signature. 105 111 IPR019825 -
Aed6g1266 619 CDD lectin_legume_LecRK_Arcelin_ConA 1 217 IPR001220 GO:0030246
Aed6g1266 619 PANTHER LECTIN RECEPTOR KINASE 1 587 - -
Aed6g1266 619 CDD STKc_IRAK 312 574 - -
Aed6g1266 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Aed6g1266 619 Gene3D - 1 236 - -
Aed6g1266 619 Pfam Legume lectin domain 2 228 IPR001220 GO:0030246
Aed6g1266 619 PANTHER - 1 587 - -
Aed6g1266 619 ProSitePatterns Protein kinases ATP-binding region signature. 312 335 IPR017441 GO:0005524
Aed6g1266 619 ProSiteProfiles Protein kinase domain profile. 306 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1266 619 SUPERFAMILY Protein kinase-like (PK-like) 290 589 IPR011009 -
Aed6g1266 619 SMART serkin_6 306 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1266 619 Gene3D Phosphorylase Kinase; domain 1 291 382 - -
Aed6g1266 619 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 221 IPR013320 -
Aed6g1266 619 Pfam Protein kinase domain 308 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1266 619 ProSitePatterns Legume lectins alpha-chain signature. 191 200 IPR000985 -
Aed6g1266 619 Gene3D Transferase(Phosphotransferase) domain 1 383 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1266 Aed-Chr6 17434428 17436423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1266 1 586 Receptor kinase-like Gene Family AT5G10530 45.151 2.85e-171 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed6g1266 Pkinase 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1266 - - gmx:102662919 1020.38