Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1264 ATGTTGGGTACCTCGGAACATTTCTACTGCTTCAGAACTTGTCTTCTTTTGACAATCTTTATGTTCCTTCCAATAGTTCAACCTCAACCACTGTCCTTCAACATAACTAACTTTAGCAACCCTGAAAGCGCAAGCCTCATTAAATACGCAGGCGTAGCCAAAGTTGAGAACGGAACCATAGTGCTGAATCCACTCGTCAACAATGGAGTTGGACGAGCCACCTATAGCCAATCTCTGAGTCTGAAGAACGCTACTAAGGGAGATGTCACAGACTTCTCTACTCGTTTTTCATTCACTATCGACGCGCCCAATAAAACCAACTACGGTGATGGCTTCGCCTTCTACATCGCACCCGCTGCATTTGACTATCAGATTCCACCTAATTCATCTGGTTTTCGTCTCGGCCTATATGGTGACACCAAAGATAACATCGTTGCTGTCGAATTTGACACACACGTGGACGATGACGACCCACCAATGAAGCACGTAGGGATCAACAATAACTCTGTTGCATCGCTTGAGTATAAGAAGTTTGATATTGAGAGCAACATAGGGAAGATGGTGAATGCGTTGATAACTTACAATGCTTCTGCAAAACTCCTTGCTGTCTCGTGGTTCTTTGAGGGAACTGGTTCTGGTTTTACGCCTAACGATTCTCTCTCACACCAGATTGACCTCGGGGAAATTCTACCAAAGTGGGTCACAGTTGGGTTTTCAGGTGCAACCGGGTCGTCCAAAGAGAAGAATGTTATCCATTCCTGGGAATTCAGACCAAATTTAGATCTAAATTCCACGAATCGAGAGGTAAGCAATGAAAATGTCATGATAATTACCAAATACAAGGTTCAGGTCAAAGTAATAGTTGTTGCAGTGATTTGTTCTAACATTATTGTGCTCGTGGTTGTTAGTATTACTACTTGGTTGATCATCAAGAAGAGATCAAGAAGCAAAGATTGTTTTGATTTGGATAAAGCGTCTATGCCGAGAAGATATGGTTATAAGGTGTTAGTTGCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTCGGAGAAGGAGGCTCTGGACAAGTTTACAAAGGGTTTCTCAGTGATCTAGGGCGCGTGGTTGCGGTTAAAAGGATTTTTTCTGATGTTCAAGATTCTGAGGAAATATTCACGAACGAGATGAAGATTATAAGTCGTCTTATACATAGAAACCTTGTGCAATTCATAGGGTGGTGCCACGAGCAAGGGGAGTTATTGCTGGTTTTCGAGTACATGACTAATGGAAGTCTTGACACTCATATTTTTGGAAACAATAGAAGAACCTTGACATGGGATGTGAGATACAAGATAGCATTAGGTGTGGTGAGAGCACTTCGATATCTGCATGAAGACGCGGAGCAGTGTGTTCTTCATAGGGATATTAAGTCGGGTAATGTTTTGTTGGACACAGATTTCAACACTAAGGTCAGTGACTTTGGGATGGCGAAGTTGTTGGATCCAAGATTGAGGACTCAAAAGACAAGGGTGGTGGGAACATATGGGTATCTGGCTCCTGAATATATAAACCAAGGAAGGGCTAGCAAGGAATCAGACATGTACGGTTTTGGGGTTGTGGCTTTGGAGATGGCATGTGGAAGGAGGACTTACCAGGATGAGGAGCATAACCATGTGCCTTTAGTGAATTGGGTTTGGAAATATTATATGGAAGGGAATGTATTGAATGCTGCTGATAAGGGATTGAACCTGGATTTTGATGTGGTTGAAATGAGATGCTTGCTCATTGTGGGACTATGGTGTACTCTCCATGACCACAAGAAAAGACCAAAGGCAGAACAGGTTATTAATGTTCTTAAGCAAGAAGCGCCATTGCCAAAGCTTTCTACATGA 1872 0.4284 MLGTSEHFYCFRTCLLLTIFMFLPIVQPQPLSFNITNFSNPESASLIKYAGVAKVENGTIVLNPLVNNGVGRATYSQSLSLKNATKGDVTDFSTRFSFTIDAPNKTNYGDGFAFYIAPAAFDYQIPPNSSGFRLGLYGDTKDNIVAVEFDTHVDDDDPPMKHVGINNNSVASLEYKKFDIESNIGKMVNALITYNASAKLLAVSWFFEGTGSGFTPNDSLSHQIDLGEILPKWVTVGFSGATGSSKEKNVIHSWEFRPNLDLNSTNREVSNENVMIITKYKVQVKVIVVAVICSNIIVLVVVSITTWLIIKKRSRSKDCFDLDKASMPRRYGYKVLVAATNGFADDRRLGEGGSGQVYKGFLSDLGRVVAVKRIFSDVQDSEEIFTNEMKIISRLIHRNLVQFIGWCHEQGELLLVFEYMTNGSLDTHIFGNNRRTLTWDVRYKIALGVVRALRYLHEDAEQCVLHRDIKSGNVLLDTDFNTKVSDFGMAKLLDPRLRTQKTRVVGTYGYLAPEYINQGRASKESDMYGFGVVALEMACGRRTYQDEEHNHVPLVNWVWKYYMEGNVLNAADKGLNLDFDVVEMRCLLIVGLWCTLHDHKKRPKAEQVINVLKQEAPLPKLST 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1264 623 Pfam Legume lectin domain 31 263 IPR001220 GO:0030246
Aed6g1264 623 Gene3D Phosphorylase Kinase; domain 1 305 419 - -
Aed6g1264 623 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Aed6g1264 623 SUPERFAMILY Protein kinase-like (PK-like) 327 612 IPR011009 -
Aed6g1264 623 Gene3D Transferase(Phosphotransferase) domain 1 420 622 - -
Aed6g1264 623 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Aed6g1264 623 ProSiteProfiles Protein kinase domain profile. 343 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1264 623 SMART serkin_6 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1264 623 Gene3D - 29 285 - -
Aed6g1264 623 CDD lectin_legume_LecRK_Arcelin_ConA 31 260 IPR001220 GO:0030246
Aed6g1264 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Aed6g1264 623 PANTHER - 30 622 - -
Aed6g1264 623 PANTHER LECTIN RECEPTOR KINASE 30 622 - -
Aed6g1264 623 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 267 IPR013320 -
Aed6g1264 623 Pfam Protein kinase domain 344 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1264 Aed-Chr6 17431296 17433167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1264 13 623 Receptor kinase-like Gene Family AT5G10530 42.453 2.55e-159 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed6g1264 Pkinase 6.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1264 - - gmx:100813751 1011.13