Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1261 ATGAATTTCCTAGCTCTGCCACTCAGATCACTAGAGAAAATGGTGATCACAGTTTTTATTCTTCTGGTGTTGGCCTTTCCTTCTGCTCTCAAAACAGCTGAATCACTCAATTTCAACATAACAAACTTCAACGACCCTGCTGCGGAAAATATGTTATATGTTGGCGACGGAAAATCAAACAAAAACGGTTCCGTAGAGCTCAACATAGTGGACTATCTTTTCCGCGTTGGAAGAGCCTTGTACGGGCAACCCCTGCACCTGTGGGACTCATCTTCTGACGTTGTCACAAATTTCACAACGCGCTTCACTTTCACTATTGACAGAGGAAACAACAAAAGCGCTTCTTATGCTGACGGCTTCGCTTTCTACATAGCCCCTCATGGCTACCAGATTCCTCCCAACGCAGCTGGCGGCACTTTTGCGCTTTTCAATGTAACATCGAATCCCTTCATTCCCAATAACCACGTGCTCGCGGTTGAGTTTGACACGTTTAACGGCACTATTGATCCTCCCTATCAGCACGTTGGCATAGACGATAACTCTCTCAAATCCGTCGCTACTGCTGCAATTGACATCGACAAAAACCTCGGAAAGAAATGCAACGTTTTGATAACCTACGACGCTCCGAACAAGACACTCTCCGTGTCTTGGTCCTTTAACGGTGCCGCAACGCCGAATTCGAAGAACTCTTCGGTTTCTGCCCAGATTGACGTCAAGGACATTCTACCCGACTGGGTGGATGTTGGGTTCTCCGCTTCAACCGGTGACCTCACTGAACAAAACATTATTCATTCCTGGGAGTTCAGTTCAACGTTGAACTCTTCAACTGCTTCGAGTAACACTTCCAAAGATAGTAGTGGAGGGTTGGGCGCGGTTGCGGTGGCTGTTTTGGTGGCGTGTGCGATTCTTTTGGCGGCCGCGGCCGCAAATGTTGTAGCTTGGGTGATAATCCTGAAGAACAAGAAGAGAAGAAGGGGTAAGGGTTATATTAGTAATAGTGATAATGATGAAGGTGGAGCCGCGTCGGTTAAGTTTGATTTGGATAGGGAAACTATACCTAGAAGATTTGAATACAAAGAACTAGTTGCTGCCACCAAAGGGTTCGCTGATGATGCAAAGCTTGGACGAGGTGGTTCGGGACAGGTTTACAAAGGGGTTCTGAGTCATTTAGGAAGGGTTGTTGCTGTCAAGAGGATTTTCACTAACTCTGAAAGTTCAGAGAGAGTTTTCATAAACGAGGTTAGGATCATAAGCCGTCTTATACACAGAAACTTGGTCCAGTTCGTAGGGTGGTGCCATGAGGAAGGAGAGTTTCTGTTGGTTTATGAGTTCATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGAGAAAAAAACTTTGGCCTGGGATGTCAGGTACAAGATAACATTAGGTGTGGCTTTGGCACTTCGTTATCTTCACGAGGATGCAGAGCAAAGTGTTCTTCACAGGGATATTAAGTCAGCAAATGTGTTGTTGGACACAGATTTCAGCACAAAGCTTGGCGATTTTGGGATGGCGAAGTTGGTGGATCCAAGGTTGAGGACTCAGAGAACAGGGATTGTGGGGACATATGGGTACCTTGCCCCAGAATATCTCAATGGAGGTAGGGCTAGCAAAGAATCAGACATCTATAGTTTTGGTGTTATGGCTCTTGAAATTGCATGTGGTAGGAGGATTTATCAAGATGGAGAGTTTCATGTGCCTCTTGTAACATGGGTGTGGCAAAAATATGTGAAAGGGAATGTTTTGGATGTTGTTGATGAGAGACTCAACAAGGAATTTAACGTGGATGAGATGACAAACTTGATTGTTGTGGGGTTGTGGTGTACTAACCCTAACGACAAGGAAAGGCCTAAGACTGCAGAGGTAATAAAAGTTCTTCAGCTTGAAGCTCCATTGCCGGTGCTTCCACCTGATATGCATGATCGTGCTCCTCTTGCTCTAAATGCGTATACGCATGCACAACCCACACATGATTCCTTGCAATCAGCACCCTTCACTAACAGCCTTACAAGTGTTGGACGCTAA 2052 0.4566 MNFLALPLRSLEKMVITVFILLVLAFPSALKTAESLNFNITNFNDPAAENMLYVGDGKSNKNGSVELNIVDYLFRVGRALYGQPLHLWDSSSDVVTNFTTRFTFTIDRGNNKSASYADGFAFYIAPHGYQIPPNAAGGTFALFNVTSNPFIPNNHVLAVEFDTFNGTIDPPYQHVGIDDNSLKSVATAAIDIDKNLGKKCNVLITYDAPNKTLSVSWSFNGAATPNSKNSSVSAQIDVKDILPDWVDVGFSASTGDLTEQNIIHSWEFSSTLNSSTASSNTSKDSSGGLGAVAVAVLVACAILLAAAAANVVAWVIILKNKKRRRGKGYISNSDNDEGGAASVKFDLDRETIPRRFEYKELVAATKGFADDAKLGRGGSGQVYKGVLSHLGRVVAVKRIFTNSESSERVFINEVRIISRLIHRNLVQFVGWCHEEGEFLLVYEFMPNGSLDTHLFGEKKTLAWDVRYKITLGVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLRTQRTGIVGTYGYLAPEYLNGGRASKESDIYSFGVMALEIACGRRIYQDGEFHVPLVTWVWQKYVKGNVLDVVDERLNKEFNVDEMTNLIVVGLWCTNPNDKERPKTAEVIKVLQLEAPLPVLPPDMHDRAPLALNAYTHAQPTHDSLQSAPFTNSLTSVGR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1261 683 PANTHER LECTIN RECEPTOR KINASE 36 649 - -
Aed6g1261 683 PANTHER - 36 649 - -
Aed6g1261 683 CDD lectin_legume_LecRK_Arcelin_ConA 36 272 IPR001220 GO:0030246
Aed6g1261 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Aed6g1261 683 Pfam Protein kinase domain 369 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1261 683 ProSitePatterns Protein kinases ATP-binding region signature. 374 397 IPR017441 GO:0005524
Aed6g1261 683 ProSitePatterns Legume lectins alpha-chain signature. 242 251 IPR000985 -
Aed6g1261 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 272 IPR013320 -
Aed6g1261 683 Gene3D Transferase(Phosphotransferase) domain 1 445 648 - -
Aed6g1261 683 ProSiteProfiles Protein kinase domain profile. 368 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1261 683 CDD STKc_IRAK 374 636 - -
Aed6g1261 683 Gene3D - 33 285 - -
Aed6g1261 683 Pfam Legume lectin domain 35 281 IPR001220 GO:0030246
Aed6g1261 683 Gene3D Phosphorylase Kinase; domain 1 353 444 - -
Aed6g1261 683 SMART serkin_6 368 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1261 683 SUPERFAMILY Protein kinase-like (PK-like) 352 649 IPR011009 -
Aed6g1261 683 ProSitePatterns Legume lectins beta-chain signature. 157 163 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1261 Aed-Chr6 17412063 17414978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1261 21 648 Receptor kinase-like Gene Family AT5G10530 44.306 2.56e-174 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed6g1261 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1261 - - gmx:100305427 1075.85