Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1260 ATGTTGTCTACCTCGGAACATTTCCACCACTTCAAACCTTTTCTTCTTTTCTGCTTCTTTATCCTTATTCCAATAGTTGAACCACTTTCCTTCAACATACCTGACTTCAACAACAGTGTTACTGAAAGCGCAAGCCTCATTGGATACGCAGGCGTAGCCAAGAACGAGAACGGAACCATAGTGCTGAATCCACTCGTCACCAATGGAGTTGGACGAGCCATCTATGGCCAACCTTTGCGCCTCAAAAACTCTTCTAACGGAAACGTCACTGACTTTTCTACTCGCTTTTCATTCACTATCGATGTGCCAACTCCAACCAACTACGGTGACGGCTTCGCCTTCTACGTGGCACCCCTTGCTTTTCAGATTCCACAAAATTCAGAATCTGATGGTAGCACTCTCGGCCTTTACGGTGACACCAAAAACAACATCGTTGCTGTCGAATTCGACACTTACGTAAACGATAATGACCCGCCAGTGCAGCAGCACGTAGGGATCAACAATAACTCTGTTGCATCGCTTGAGTATAAGAAGTTTGATATTGAGAACAACATAGGGAAGATGGTGCATGCGTTGATAACTTACAACGCTTCTGCAAAAGTCCTTTCTGTCTCGTGGTTCTTTGAGGGAACCGGTTCTCGTTTTACGCCTAACGATTCTCTCTCACACCAGATTGACCTCGGGGAAATTCTACCAGAGTGGGTCACTGTTGGGTTTTCAGGTGCAACAGGCTCGTCCAGTGAGGAAAATGTTATTCATTCATGGGAATTCAGTTCAAGTCTGAATTCAACGTATTTAGAGGTAAACAAAGGAAACACTGACATCGTAGTTAAACACAAGTTTCAAGTGAAAGTAGTAGTTATTTCAGTGATTTGTTCTATTATTGTTGTGCTCGTGGTTATTAGTATTACTTGGTTGATCATCAAGAAGAGATCAATAAGCAAGGATGGTTTTGATTTGAATAAAGCGTCTATGCCGAGAAGATATGGTTATAAGGAATTAGTAGCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTCGGAGAAGGAGGCTCTGGACAAGTCTACAGAGGCTTTCTCAGTGATCTAGGGCGCGTGGTTGCGGTGAAGAGAATATTTTCTGATGTTGAAGATTCTGAAGAAATATTCACAAACGAGGTGAAGATTATAAGTCGTCTTATACATAAAAACCTTGTTCAATTCATAGGGTGGTGTAATGAGGAAGGGGAGTTGTTAATGGTTTTTGAGTACATGACTAATGGAAGCCTTGACAATCATCTCTTTGGCAACAGAAGAACTTTGGCATGGGGTGTGAGATACAAGATAGCGTTAGGTGTGGCGAGAGCACTTCGATATCTTCATGAAGACGCGGAACAGTGTGTTCTTCATAGGGATATAAAGTCAGGTAATGTTTTGTTGGACACGGATTTCAATACTAAGGTTAGTGACTTTGGGATGGCGAAGTTGGTGGACCCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGAACATATGGTTACTTGGCTCCGGAATATGTGAAAGAAGGAAGGGCTAGCAAGGAATCAGACATGTACAGTTTTGGGGTTGTGGCTTTGGAGATAGCATGTGGAAAGAGGACTTACAAGGATAAGGAGCATAATCATGTGCCTTTGACCAATTGGGTGTGGAAGCATTATGTGGAAGGGAATATTTTAAATGCTGCTGATAAGGAATTGAAAGGGGATTTTGATGTGAATGAAATGAGATGTTTGCTCACTGTGGGAATATGGTGTACCCACCCAGATCACAAGAAAAGGCCAGAGGCAGAGGTGGTTATTAATGTCCTTAAGCAAGAAACGCCATTGCCAATGCTTTCTATATGA 1863 0.4283 MLSTSEHFHHFKPFLLFCFFILIPIVEPLSFNIPDFNNSVTESASLIGYAGVAKNENGTIVLNPLVTNGVGRAIYGQPLRLKNSSNGNVTDFSTRFSFTIDVPTPTNYGDGFAFYVAPLAFQIPQNSESDGSTLGLYGDTKNNIVAVEFDTYVNDNDPPVQQHVGINNNSVASLEYKKFDIENNIGKMVHALITYNASAKVLSVSWFFEGTGSRFTPNDSLSHQIDLGEILPEWVTVGFSGATGSSSEENVIHSWEFSSSLNSTYLEVNKGNTDIVVKHKFQVKVVVISVICSIIVVLVVISITWLIIKKRSISKDGFDLNKASMPRRYGYKELVAATNGFADDRRLGEGGSGQVYRGFLSDLGRVVAVKRIFSDVEDSEEIFTNEVKIISRLIHKNLVQFIGWCNEEGELLMVFEYMTNGSLDNHLFGNRRTLAWGVRYKIALGVARALRYLHEDAEQCVLHRDIKSGNVLLDTDFNTKVSDFGMAKLVDPRLRTQKTKVVGTYGYLAPEYVKEGRASKESDMYSFGVVALEIACGKRTYKDKEHNHVPLTNWVWKHYVEGNILNAADKELKGDFDVNEMRCLLTVGIWCTHPDHKKRPEAEVVINVLKQETPLPMLSI 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1260 620 PANTHER - 29 619 - -
Aed6g1260 620 PANTHER LECTIN RECEPTOR KINASE 29 619 - -
Aed6g1260 620 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 267 IPR013320 -
Aed6g1260 620 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Aed6g1260 620 Gene3D Transferase(Phosphotransferase) domain 1 418 618 - -
Aed6g1260 620 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Aed6g1260 620 CDD lectin_legume_LecRK_Arcelin_ConA 29 261 IPR001220 GO:0030246
Aed6g1260 620 ProSiteProfiles Protein kinase domain profile. 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1260 620 Pfam Protein kinase domain 342 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1260 620 SUPERFAMILY Protein kinase-like (PK-like) 325 609 IPR011009 -
Aed6g1260 620 Pfam Legume lectin domain 29 262 IPR001220 GO:0030246
Aed6g1260 620 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Aed6g1260 620 Gene3D - 27 273 - -
Aed6g1260 620 SMART serkin_6 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1260 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Aed6g1260 620 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1260 Aed-Chr6 17408481 17410343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1260 15 618 Receptor kinase-like Gene Family AT5G10530 43.790 8.69e-169 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed6g1260 Pkinase 3.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1260 - - gsj:114391975 974.926