Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1257 ATGGGAACAAATCTCAGCACTCCCAAAACTGAAAAGTCTTCCGATGATGGTGAAAATGAGCATCTTAGATATGGTTTATCATCTATGCAAGGCTGGCGTTCAACAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCATCCACTTCCTTTTTTGGTGTTTATGATGGTCATGGAGGTAAAGTGGTTGCAAAGTTTTGTGCTAAGTATCTTCACCAGCAGGTGCTCAAGAATGAAGCATACATAGCTGGAGACATAGGAACCTCACTTCAGGAATCATTTTTCAGAATGGACCAGATGATGCGTGGTCAAAGGGGGTGGAGGGAATTAGCAGTTTTGGGTGATAAGATGAACAAGTTTAATGGTAAGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGAGAAAGTAAGGAGCAAGATGATACTTGGGCTTTTGAGGAGGGTCCTCATTCTAATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAATTGTTAGAAACAACAAACTTGTTGTATCAAATGCTGGTGATTCACGCTGTGTAATATGTAGGAAGGGTCAGGCATATGACTTGTCTATAGATCATAAACCTGATCTTGATATTGAGAAGGAAAGAATCATTAAAGCTGGTGGTGACATGGAATTTAAGCAGAATAGATTCCTTTCTGCTGAAAAGCAAATGGTGACAGCCAATCCAGACATAAACACTGTTGAACTTTGTGATGATGATGAATTTATAGTGCTAGCTTGTGATGGCATATGGGATTGTTTGTCAAGCCAACAATTGGTAGATTTTGTACGTCAACAACTGCTCTTGGAAACTAAACTTTCTGCGGTTTGTGAAAGAGTACTAGATCGATGTTTGGCACCAACAATCACTGTTGGTGATGGATGTGATAACATGACCATGATTTTGGTGCAGTTCAAAAAACAAGCTACATCTGAACTAAGACTAATGGAGAGCAGTGAAAGTTAG 984 0.4055 MGTNLSTPKTEKSSDDGENEHLRYGLSSMQGWRSTMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKNEAYIAGDIGTSLQESFFRMDQMMRGQRGWRELAVLGDKMNKFNGKIEGLIWSPRSRESKEQDDTWAFEEGPHSNFAGPTSGSTACVAIVRNNKLVVSNAGDSRCVICRKGQAYDLSIDHKPDLDIEKERIIKAGGDMEFKQNRFLSAEKQMVTANPDINTVELCDDDEFIVLACDGIWDCLSSQQLVDFVRQQLLLETKLSAVCERVLDRCLAPTITVGDGCDNMTMILVQFKKQATSELRLMESSES 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1257 327 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Aed6g1257 327 PANTHER PROTEIN PHOSPHATASE 2C 1 319 IPR015655 GO:0004722|GO:0006470
Aed6g1257 327 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 1 319 - -
Aed6g1257 327 SMART PP2C_4 13 309 IPR001932 -
Aed6g1257 327 MobiDBLite consensus disorder prediction 1 20 - -
Aed6g1257 327 SUPERFAMILY PP2C-like 4 312 IPR036457 -
Aed6g1257 327 Pfam Protein phosphatase 2C 153 294 IPR001932 -
Aed6g1257 327 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Aed6g1257 327 Gene3D - 1 312 IPR036457 -
Aed6g1257 327 CDD PP2Cc 23 311 IPR001932 -
Aed6g1257 327 ProSiteProfiles PPM-type phosphatase domain profile. 23 311 IPR001932 -
Aed6g1257 327 SMART PP2C_SIG_2 28 311 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1257 Aed-Chr6 17358619 17363389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1257 1 318 PP2C-type Phosphatase Gene Family AT2G25070 70.833 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1257 K17499 - gmx:100793667 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1257 6 17358619 17363389 Aed6g1257 6 17358619 17363389 ECH
Aed6g1257 6 17358619 17363389 Aed4g1725 4 21624331 21629538 PCT