Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1253 ATGGCTGGTTCTTCAACAAAAACCTCAGCTTCTCTTTTGATCCTTTTTGTTCTCTTTGGTTTCTCTGTGGCTAGGGAAATATTAGTTGGAGGCAAAACTGATGCATGGAAGGTTCCAGCCTCCTCTGAATCAGACCCACTCAACCAATGGTCCCAAAAGTATCGTTTCCAAGTTGGAGACTCTCTTGTTTGGAAATATGATGGTGGAAAAGACTCAGTGTTGGAAGTGAGCAAAGAGGACTATGGGAACTGCAACATCTCAAACCCCATAAGGGAGCACAGTGATGGGACCACAAAGGTGAAGCTTGAACATCCAGGGCCATTCTACTTCATCAGTGGAGCAAAGGGTCACTGTGAGAAGGGTCAGAAGTTACTTGTGGTGGTTTTGACTCCAAGGAAAAGTGTTGTTTCTACTTCAGCAGCACCTTCACCTTCTCCTTCTTCTGATTCTGCTGAGTTTGGAGGTGGTCCTGCTGTTCCTCCTACTAGCAGTGCCACTGCTTTGAATGGAGGCTTTGTGATGATGGCTTTGGGAGTAGTTGCTGCTATGTGGGTGTTTTCTATGTGA 567 0.4586 MAGSSTKTSASLLILFVLFGFSVAREILVGGKTDAWKVPASSESDPLNQWSQKYRFQVGDSLVWKYDGGKDSVLEVSKEDYGNCNISNPIREHSDGTTKVKLEHPGPFYFISGAKGHCEKGQKLLVVVLTPRKSVVSTSAAPSPSPSSDSAEFGGGPAVPPTSSATALNGGFVMMALGVVAAMWVFSM 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1253 188 Gene3D - 23 133 IPR008972 -
Aed6g1253 188 Pfam Plastocyanin-like domain 36 122 IPR003245 GO:0009055
Aed6g1253 188 PANTHER EARLY NODULIN-LIKE PROTEIN 3 7 149 - -
Aed6g1253 188 PANTHER BLUE COPPER PROTEIN 7 149 IPR039391 GO:0009055
Aed6g1253 188 MobiDBLite consensus disorder prediction 137 158 - -
Aed6g1253 188 CDD OsENODL1_like 25 129 IPR041846 -
Aed6g1253 188 ProSiteProfiles Phytocyanin domain profile. 25 130 IPR003245 GO:0009055
Aed6g1253 188 SUPERFAMILY Cupredoxins 24 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1253 Aed-Chr6 17341201 17344563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1253 1 186 Phytocyanin Superfamily AT4G31840 50.538 9.15e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1253 - - gmx:100527857 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1253 6 17341201 17344563 Aed6g1253 6 17341201 17344563 ECH
Aed6g1253 6 17341201 17344563 Aed4g1729 4 21657433 21663923 PCT