Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1247 ATGGCATTGTTCCGGAAGTTCTTCTATAAGAAGCCCCCAGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAGGATGAATATAAAGTGTATATAGGGGGAATAATTGGTCAACTTCGTGGTCACTTCCCCGATGCTTCATTTATGGTGTTCAACATGCGGGAGGGAGATACCCAAAGCCAGATTTCAAACATTTTGTGCGACTATGATATGACTGTGATAGACTATCCTCGGCAGTATGAAGGTTGCCCATTACTTACCATGGAGATGATCCACCATTTCTTGAGATCGGGTGAAAACTGGCTTCAACTTGGGCAACAAAATATTGTCTTGATGCACTGTGAACGAGGTGGCTGGCCATTATTAGCATTTATGCTGGCTGCACTCTTGATTTATAGAAAGATGTTTACAGGGGAGCAGAAAACACTAGACATGATATACAAGCAAGCTCCTCGGGAACTTTTGCAGTTGATGTCACCGTTGAATCCATTACCTTCACAATTGAGGTATATTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTTACTTTGGACTGTGTAATTATACGATTCATTCCTAATATGGCTGGAGAAGGTGGCTGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTTCAGACCGAACTCCCAAAGTTCTCTTTTCAACTCCAAAAAGGAGCAAATTTGTCCGCTATTACAAGCAGGTGTCTGATTGTGAATTGGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTCGTTTTTGAGTGTATTCATCTGAACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAATCGTGATGAGATTGACATATTATGGAATGCTAAAGACTACTTCCCTAAAAATTTTAGAGTCGAGGTTCTTTTCTCAGATATGGATGCTTCGTCTTCTGTTATTTCAATTGATCTGCCTCATGTTGAGGAGAAAGAAGGCCTACCTGTTGAAGCATTTGCTAAAGTCAAGGAAATTTTCAGCAATGTGGACTGGCTAGATTCAAAGGCAGATGTAGCAAGTGTGCTCCAACAAATCACAGCATCAAATATTCTTCTGGAAAGATTCGACAGTGGGGTTTCTGGTGCAACAAGTGACTTGGAAAAGGAGTCATCTGGAAAATTTCAACTCAATCCAAAGGCACACAGTGATGCAAAGAATCTGACTCCTTCAGTTCAGAAGAAACTTTCTACATCCTCCTTGGGATCATCTGTGGATGTTCCTATGGAAAATAAGACAGAACCATTAGAATCAAAGGTATTGTCAAAAAATAATGTTGAGAATCTTGAATGTTTAGGTAAGGGGAACCAACCTATTCCCTCATTTGGGCTTGCAACAGATTCAGATTCAACTAAAAAGAAGATAAAACAATCACTGGAAAATGATACCAAGTTTACCGCATCTATGGCCCATGAGAGTCAATCTATCCCCTTAATTAAACCATCAATGGATGCAAATTTAATAAAAAAAGAGAGTGGATCGTTAGTATCCAAGGAGAAGGATATTGAGTCATTAGCATCAAAGGCACTTATGGAAAATGACACCATGTTTCCTACATCTGTAGCTCAGGGGAAACAATCTGTTCCCTTAATTAAACCATCCACTCATGCAGATTTATTGGAAAAGAAGACTGATTTGTTAGGGTCAAAGGAGAATGATAGCAGATTCAAATTTGAGCCAAAGCCACTTCCAGAAATTGATACAAGACGTCCTACATCTGAAGTTGAAGGGAAACTTTCTATGCCCTCATTTGAATCATCTGGTAAAGCTCCTATGGAAAATAATGAAGATTCTCTAGACTTAAAGGCATTGCCAGAAGACAACATCAAGACTCTTGCTTCCATGAGTCAGGGGAAACAGCTTATTCCCTCATCTGGACTCTCAACAGATTCTAGTTCTACTGAAATGCCAATTGAATCATTAGAATCAAAGGCATCGGTGGAAAAAGATACCAAGGTTTCTACATCTATGGCTCATGGGAAGCAGTCAATGCCCTTAATTGAACCACCAAAAGATGCAAATTCAATGAAACAGAAGATGGGACCATTAGAGTCAAAGGAAAAGAATACCGAATCATTAGAATCAAAGTCATTGCCAGAAAATGATGCCAATAGTGTCACATCCACAGTTCAGAGGAAACAATATAGTCCCATACTTGAGCCGCTCGTTGATGCAAACCTAATTAAAAAGGAGGCCGAACCTCAAGAATTGCAGGTTGGACTTCAGCTTCCCACTCAACCTAAAATAATTTCACCACTGGTGCGTCCAGCTGTTCGATCTGCTTCAGCTTCTTATTTTAAATCCTTTCAAAGTTCACCTGTAGCTATCTCAAGGTATCATAGTGCACCATCAGCTCTTGGAATAACATCTGTGTTGCAGGATCATGCACCAATGGATGTCAAAGAAGTCACGCATGCAGTGACAGTATCTCCTCAGCCTTCAGACTCCAAGGTGCCAAGTTCTATGAAGCCTAGTTCTACAATTGTTTCTCCAGGATCATCACCACCTTTGCTTTCATCTTTACCATTAAAAGCTTCAGTTGATGCTATTACTGCCATGGAAAAGACTTTTGGATCCTTTGCTCCTGCAGCTATTGCTCTTCCTCCTCCTCCTCCCCCACCACCACCTCCTCCTCAAAGCGAGCATACTCCAATGCATGATGAAGGTAAGAAATCATTGGTTAGTCCACCTCCTCCTGCTCCACCCCTTCCTGAAACATCACTTTCCACTGTCAAATATTCATTTAAAGGTCCTCCTCCACCACCGCCCCCGCCTACACCTCCACCTTCAACCAGTCAGGCTTTGCCATCCTCAATACCTCCTCCTCCTCCTCCACTGTCTGCTGCTAAGCCTGGCCCTCCTCCTCCACCTCTACCTCCTAGCCATTCTGGTGCTACTCCATCACCATTAGCACCACCACCACCACCTCCTCCAGCTTCTGCATCCCAAAATTCTGGAAATGTTCCACCTCCCCCACCTCCCCTTTCAAAATCTGCAGTTCCTGGAGCACCTTCTGTTCCTGGACCACCTTCTGCTCCATTTGGTGCAAAGGGGCGTGGCAGCCTGTTGCGAGCTAATCCAAAAGGTCTGTCTCAGACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACGAGGGCTATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAGTTTGATATGTCAGAGCTTGAGACTTTGTTCTCTGCAGCTACACCAAATTCTACTGATGGAAAAGGAGGAAAGTTAAATCAGCGCTCCTCGCAAAAAGTTGACAAAGTTCAATTGATTGAGCTCAGGCGGGCGTATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCTGAGTTGATGTGTTCTGTGCTTGCATTGGATGACTCAGTATTGGATTTTGATCAAGTTGAGAACCTCATAAAATTTTCTCCTACCAAAGAAGAGATGGAGACGCTTAAGAACTATAATGGGGATAAGGACAACTTGGGAAAGTGTGAATTGTTCTTCATAGAATTAATGAAAGTGCCAAGAGTGGAAAACAAGCTAAGAGTTTTCGCTTTTAAGATGCAATTCTTATCCCAGGTTTCAGAGCTTAAAAGGGACTTGAATATTGTAAATAATGCATCTGAAGAGACCATTCTTTCTCTGGGTAATGCCTTGAACCATGGAACTGCAAGAGGTTCGGCTGTTGGGTTTCGATTGGATAGTCTCCTTAAACTCACTGATACACGAGCCAGAAACAACAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTTGGTGAAAAGCTTCCAGAACTTCTAGATTTCCACAAAGACCTAGAGAGTCTGGAGGCTGCATCCAAGCTACAATTAAAATATTTGGCAGAGGAAATGCAAGCTGTTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAACGATGGATCTGTGTCAGAAAACTTCTGCCAGATTCTGAAGGAATTTCTTTCTTATGCTGAATCTGAAGTGAGATCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTATACTTTGGCGAAGATCCAGCACGTGTCCCATTTGAACAAGTTGTGACTACTCTCCTCAACTTTGTGAGAATGTTCGTAAAAGCACAGATAGAAAATTGCAAGCAGGTTGAATTAGATAAAAAGAGAGCAGAGAAGGAAGCAGAAAACGAAAAATCAAAGCTAGCTGCTGCTAAGGAGTCTGAACAGGTGATAAGGCCCCCCATAAAGAGTGGAGATATCAAATGA 4449 0.4165 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEDEYKVYIGGIIGQLRGHFPDASFMVFNMREGDTQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNIVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYIQYISRRNVGSEWPPLDRALTLDCVIIRFIPNMAGEGGCRPIFRIYGQDPFIPSDRTPKVLFSTPKRSKFVRYYKQVSDCELVKIDIHCHVQGDVVFECIHLNSDLEHEEMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDYFPKNFRVEVLFSDMDASSSVISIDLPHVEEKEGLPVEAFAKVKEIFSNVDWLDSKADVASVLQQITASNILLERFDSGVSGATSDLEKESSGKFQLNPKAHSDAKNLTPSVQKKLSTSSLGSSVDVPMENKTEPLESKVLSKNNVENLECLGKGNQPIPSFGLATDSDSTKKKIKQSLENDTKFTASMAHESQSIPLIKPSMDANLIKKESGSLVSKEKDIESLASKALMENDTMFPTSVAQGKQSVPLIKPSTHADLLEKKTDLLGSKENDSRFKFEPKPLPEIDTRRPTSEVEGKLSMPSFESSGKAPMENNEDSLDLKALPEDNIKTLASMSQGKQLIPSSGLSTDSSSTEMPIESLESKASVEKDTKVSTSMAHGKQSMPLIEPPKDANSMKQKMGPLESKEKNTESLESKSLPENDANSVTSTVQRKQYSPILEPLVDANLIKKEAEPQELQVGLQLPTQPKIISPLVRPAVRSASASYFKSFQSSPVAISRYHSAPSALGITSVLQDHAPMDVKEVTHAVTVSPQPSDSKVPSSMKPSSTIVSPGSSPPLLSSLPLKASVDAITAMEKTFGSFAPAAIALPPPPPPPPPPPQSEHTPMHDEGKKSLVSPPPPAPPLPETSLSTVKYSFKGPPPPPPPPTPPPSTSQALPSSIPPPPPPLSAAKPGPPPPPLPPSHSGATPSPLAPPPPPPPASASQNSGNVPPPPPPLSKSAVPGAPSVPGPPSAPFGAKGRGSLLRANPKGLSQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELETLFSAATPNSTDGKGGKLNQRSSQKVDKVQLIELRRAYNCEIMLTKVKIPLPELMCSVLALDDSVLDFDQVENLIKFSPTKEEMETLKNYNGDKDNLGKCELFFIELMKVPRVENKLRVFAFKMQFLSQVSELKRDLNIVNNASEETILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLGEKLPELLDFHKDLESLEAASKLQLKYLAEEMQAVSKGLEKVVQELTASENDGSVSENFCQILKEFLSYAESEVRSLAQLYANVGRNADALALYFGEDPARVPFEQVVTTLLNFVRMFVKAQIENCKQVELDKKRAEKEAENEKSKLAAAKESEQVIRPPIKSGDIK 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1247 1482 MobiDBLite consensus disorder prediction 654 684 - -
Aed6g1247 1482 SMART PTEN_C2_2 197 338 IPR014020 -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 959 1055 - -
Aed6g1247 1482 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Aed6g1247 1482 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1017 1453 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 846 884 - -
Aed6g1247 1482 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Aed6g1247 1482 Gene3D - 196 342 - -
Aed6g1247 1482 Gene3D Formin, FH2 domain 1069 1444 IPR042201 -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 408 451 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 908 926 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 740 756 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 595 756 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 407 453 - -
Aed6g1247 1482 PANTHER FORMIN-J 1 992 - -
Aed6g1247 1482 PANTHER FORMIN-J 979 1473 - -
Aed6g1247 1482 SMART it6_source 1071 1480 IPR015425 -
Aed6g1247 1482 Coils Coil 1434 1468 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 595 618 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 725 739 - -
Aed6g1247 1482 ProSiteProfiles C2 tensin-type domain profile. 199 339 IPR014020 -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 851 884 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 1450 1482 - -
Aed6g1247 1482 Pfam Formin Homology 2 Domain 1076 1433 IPR015425 -
Aed6g1247 1482 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Aed6g1247 1482 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 339 IPR035892 -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 905 1078 - -
Aed6g1247 1482 MobiDBLite consensus disorder prediction 1450 1466 - -
Aed6g1247 1482 PRINTS Proline rich extensin signature 859 880 - -
Aed6g1247 1482 PRINTS Proline rich extensin signature 905 922 - -
Aed6g1247 1482 PRINTS Proline rich extensin signature 964 989 - -
Aed6g1247 1482 PRINTS Proline rich extensin signature 788 804 - -
Aed6g1247 1482 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1071 1459 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1247 Aed-Chr6 17273271 17285335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1247 1 403 FH2 protein (formin) Gene Family AT2G25050 71.287 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1247 - - gsj:114393863 1738.39