Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1239 ATGCTCAAACAAGAATGGTGGACCTTTATGATTCATTCTTCACACTGCAAACACACTGAGCACTTACTCAAAAAGACTAAAAAACTTGGTTCTATGGAGAAAGCAGCAATGGTTTTTCCTTTTCCAATAGCATTTTCTTGTCTTTTTATTATCTTCCATTTTACTACTTCTGTTTCAGGTAGCCTAGTTTTCAACTTCTATGCAGCTTCATGCCCCACAGCAGAACTCATTGTGAGAAACACAGTCAGTTCATCTACGTCTTCTGATCCTTCAATTCCTGGGAAGCTCCTTCGCTTGGTTTTTCATGATTGCTTTGTGGAGGGATGTGATGCATCTTTGATGCTACTAGGGAATAATACAGAACAAAATGATCCAGCAAGTAGGTCTGTTGGAGGATTTGCAGTTATAGAATCAGCAAAAAGAGTCCTTGAGTTCCTTTGTCCTGGAACAGTTTCTTGTGCTGACATAATTGCTTTGGCTGCTAGAGATGCTGTTGAACTTGTAAGTAGAAGAGATGGGATGGCTTCAATTGCTTCAAATGTCAGACCCAACATTTTGGACACCAGTTTTACAATGAATGAGATGATTAACCGCTTCTCTAATAAAGGGTTGTCTTTATTTGACCTTGTCATCCTTTCAGGGGCTCACACCATAGGAACAGCTCATTGCAGCTCATTCAGGGACAGGTTCCAAGAGGACTCCAAAGGAAAGCTCACACTCATTGACAAAACCCTAGACAGCAGCTATGCTGATGAGTTAATGAAAGAGTGTCCCTTGAATGCAAGCCCTTCTGTGCAAGTTAACAATGATCCTGAAACAGCCATGGTCTTTGACAACCAGTACTACAGAAACCTTCTCACCAACAAGGGCTTGTTCCAATCTGATTCTGCATTGCTGAGTGACAATAGGACAAGGAAGTTTGTGGAGGACTTGGCTAATGATCAAGAGTTTTTCTTTGAGAGCTGGGGCCAGTCTTTCTTGAAGCTCACTAGTGTTGGTGTCAAAAGTGATGATGAGGGTGAAATTAGAAGTTCTTGTGCATCAATTAATAATGCATAA 1059 0.4098 MLKQEWWTFMIHSSHCKHTEHLLKKTKKLGSMEKAAMVFPFPIAFSCLFIIFHFTTSVSGSLVFNFYAASCPTAELIVRNTVSSSTSSDPSIPGKLLRLVFHDCFVEGCDASLMLLGNNTEQNDPASRSVGGFAVIESAKRVLEFLCPGTVSCADIIALAARDAVELVSRRDGMASIASNVRPNILDTSFTMNEMINRFSNKGLSLFDLVILSGAHTIGTAHCSSFRDRFQEDSKGKLTLIDKTLDSSYADELMKECPLNASPSVQVNNDPETAMVFDNQYYRNLLTNKGLFQSDSALLSDNRTRKFVEDLANDQEFFFESWGQSFLKLTSVGVKSDDEGEIRSSCASINNA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1239 352 PANTHER PEROXIDASE 18-RELATED 52 349 - -
Aed6g1239 352 Gene3D Peroxidase, domain 2 186 329 - -
Aed6g1239 352 PANTHER PEROXIDASE 25-RELATED 52 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 Pfam Peroxidase 78 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 Gene3D - 65 350 - -
Aed6g1239 352 CDD secretory_peroxidase 62 349 IPR033905 GO:0004601|GO:0042744
Aed6g1239 352 PRINTS Plant peroxidase signature 268 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Plant peroxidase signature 284 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Plant peroxidase signature 95 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Plant peroxidase signature 131 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Plant peroxidase signature 207 219 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Plant peroxidase signature 71 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 208 218 IPR019793 -
Aed6g1239 352 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Haem peroxidase superfamily signature 151 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Haem peroxidase superfamily signature 208 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 PRINTS Haem peroxidase superfamily signature 93 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 SUPERFAMILY Heme-dependent peroxidases 62 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed6g1239 352 ProSiteProfiles Plant heme peroxidase family profile. 61 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1239 Aed-Chr6 17164933 17168208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1239 37 350 Peroxidase AT4G31760 59.202 5.46e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1239 K00430 K18328 gmx:100803223 575.859