Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1235 ATGGTTTGTGAGATGGTGGAGAGTGAGTGTATTATTGAGGACATGGACATTGAAGTCCTATCCTCAATGTGGCCAGAAGATATTGGAACTGATGTTGGAAAACAGTTCAATATAGAGAAGCCAGGAATAGACCAAGACATGTTGGAGGAAGTCACAATCATAGAAGAGCCAACTATAGCTGATTTCCAGCGTCTCATGGAGCTTACAAATTACACTGACAAAGGGTCTTCTCAGCTGGCATATCTCATGCAGCACTGGGAGTACAAGCAGGCCAACGCGGTTCGGCTTCTACGAGAGGAAATCGACAACCTTAGCAAACAAAGGAAGGAGGTTGAGCTCAGGAAGCTGGAGATACTCAAAGACAATCGGTTCGAGGAAGAGAATTATGGCGGTGACAAGCGTCCGGTTTCTATATTGGATGAGGTTTACTATACATGGCAGGATGTGCCGGTGCCACTCAGGAAAAGTGATGTGGTTGTGCAGAACAAGAGGGTTGAAAAGATTGATGGTGAGTGTGAGTATGACACTGCTGTGTATTGGAAACAGCGGGCGCTGCAGTTGGAAAAACAGTTGGAGGGAAGTGTCCAGAGGGAGCAGACACTGATGGAAAAGTTGCAAGAGAGTGTGAAGAGTCTTGAAAGACAGTCCTCACCTGTGGAAGAACTAACTCAGATTCTGAAGAGAGCAGATAATTTCTTACATTTTATACTCCAAAATGCACCTGTTGTTATTGGCCATCAGATTAGCTTTTCCTTAGTCTTAAGTACTAAAAGAGTTAGGACCTTGCAAGACATCATAGGAAAAACAGATGTTGAAATTTTCACAGGATCCGGTGTCAAGGAATCTCAGGATTTCAAGAGGGAAGTAATGGAGAAAGGGTTGCCTGCAAAAAAGGAAATTACTTTTGAGACAGAACTATTTGGGTCAAAGACGTTCTTGATATATGTAGAACCTGTCTTTAGCAAAGCAGGAGAGACAATTGGAATAAACTACATGGGAATGGAAATAACAGATCAGGTAAGAAAAAGAGAAAGAATGGCAAAGCTTAGGGAAGATATTGCAGTCCAGAAAGCAAAGGAAACAGAACTTAACAAAACCATTCACATTACAGTTGCTTTGGCCGCAAGAAACTTATTTTTCTCCCTACCCTTCCCTCCCTTTTCGACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCAACAATGTCTCATGAGATAAGATCTCCACTGTCTGGAGTTGTCAGCATGGCTGAAATTCTTTCCACGACGAAACTCGACCGGGAGCAAAGGCAGCTCTTGAATGTCATGATGTCTTCAGGAGATTTGGTTCTTCAACTTATTAATGACATTCTTGATCTTTCCAAGGTTGAGTCAGACACTGATCATTTAAATTTCTTCCAACCTCACAAACCTCCCTTGTTCTCTATAGGAGTTATGAAATTGGAAGCTACCAAATTCCGGCCAAGAGAAGTAGTAAAGCATGTGCTCCAGACAGCTGCAGCATCATTGCAGAAAATGTTAACCTTAGAGGGAAATGTGGCAGATGATATACCTATTGAGGTTATTGGAGATGTCTTAAGGATTCGGCAGATTCTCACAAATTTAGTCAGCAATGCGGTAAAGTTTACACATGAAGGCAAAGTTGGCATAAACCTTTATGTTGTTCCAGAGCCATCTTTTGCCAAAGGAGAAGGCCATCAAAAGATGATCACAGATCAGTCAACAAATGGGGTGAAGGAAGAGAAGCGTGCATCAACCCCGCGAAGCAGCAGTGAACAAAATTGTCTTGATGGCCAAAAACACAATGACCATCATCCTAGCCAAAATCATGCACTCAATGATGAATGTAGATCTTCAGTTAAAAGTGAATGCTCGATGAATGGAGATACCGAGGACCAAACTCATTCAACTGAAACAACAGTGTGGATACGTTGTGATGTATATGACACAGGAATTGGAATACCAGAAAAGGCTATACCTACTTTATTTAGAAGGTACATGCAAGTAAGTGCTGATCATGCTCGAAAGTATGGTGGCACAGGGCTGGGACTAGCAATATGCAAACAGCTGGTTGAGTTAATGGGGGGTCGTCTAACAGTGACTAGCAAAGAACACTGTGGTTCCACCTTCACATTCATACTTCCATACAAGGTTTCAACAGCTTGTAATGATTCTGATGACCCAGATGGGCTATCAGATGTGGATGACAATGATGATGATACAACAGAAGGGTTCTTCCAATTCCAACCACGCACTTTGGGCTCTCTCTTCTCTTCCAATGGACCTACCAGGCCTCAAAATATACTACCAGGTTTCAGAAGCTCACACAAGTTCAACGGCTTTTCGGAGAATTCTTACGCATTCCCCACCACCAACATGATATCAAAAGGGACTAGTTCAACTGAGGATGCTTCTTCAGTCATTGTTGATGCTCAAGAGATGTCTGAATCAACAAGTTCAACAAGTCACAGCCCTGAAACAAAGCGTGGAAGTGTAGTCAACAACACAAACAATAATCAGAATCAAGATAAGGCGCATGCTCAGTTGCAGAATGGTAGTGTAGACTCTTCTCAGGCAATGACTCTAGGAACAATGGCAAATGAATCACAACAAACATGTCAACATGTGAAGACAGACACCACAAACTCACAATGTGTTGTTAGTAGTAGTAATAATAACACATCATCAGAAGTAGTAACCAAATCCGCATTAGGGCCTAGGATTCTTCTTGTTGAAGATAACAAGATCAATGTCATGGTGACACAGTCAATGATGAAGAGGTTAGGTTATAGCATGGATGTTGTGAATAATGGAGTGGAAGCCTTACGTGCCGTGCAGCGCCATACTTATGATGTCATTTTGATGGATGTTTACATGCCAGTAATGAATGGTCTTCAAACAACGAAACTGATTCGGTCTTATGAGGAAACAGGAAATTGGGAAGCTGCAAGAGAAGCTGGAATTGAACAATGTTCACCACCAAATTCAAATGAATGTTCTGTTCCACCTAAAAACCGGATCCAAATCATTGCGATGACAGCAAACACAATGTCAGAGAGTGCTGAGGAATGTTATGCAACTGGTATGGACTCGTTTGTGTCAAAACCTGTGACATTCCAAAAATTGAAAGATTGTCTAGAACAGCACCTGAGTATTGGACGGGGTGCAGTTAGGGAAAGGAAGAGAGTTTATATAGAGGACCATGCACCCTTTGTAATTTTGCAGGAGATATCATCATCTCAATGA 3246 0.4205 MVCEMVESECIIEDMDIEVLSSMWPEDIGTDVGKQFNIEKPGIDQDMLEEVTIIEEPTIADFQRLMELTNYTDKGSSQLAYLMQHWEYKQANAVRLLREEIDNLSKQRKEVELRKLEILKDNRFEEENYGGDKRPVSILDEVYYTWQDVPVPLRKSDVVVQNKRVEKIDGECEYDTAVYWKQRALQLEKQLEGSVQREQTLMEKLQESVKSLERQSSPVEELTQILKRADNFLHFILQNAPVVIGHQISFSLVLSTKRVRTLQDIIGKTDVEIFTGSGVKESQDFKREVMEKGLPAKKEITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMEITDQVRKRERMAKLREDIAVQKAKETELNKTIHITVALAARNLFFSLPFPPFSTEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLNVMMSSGDLVLQLINDILDLSKVESDTDHLNFFQPHKPPLFSIGVMKLEATKFRPREVVKHVLQTAAASLQKMLTLEGNVADDIPIEVIGDVLRIRQILTNLVSNAVKFTHEGKVGINLYVVPEPSFAKGEGHQKMITDQSTNGVKEEKRASTPRSSSEQNCLDGQKHNDHHPSQNHALNDECRSSVKSECSMNGDTEDQTHSTETTVWIRCDVYDTGIGIPEKAIPTLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKEHCGSTFTFILPYKVSTACNDSDDPDGLSDVDDNDDDTTEGFFQFQPRTLGSLFSSNGPTRPQNILPGFRSSHKFNGFSENSYAFPTTNMISKGTSSTEDASSVIVDAQEMSESTSSTSHSPETKRGSVVNNTNNNQNQDKAHAQLQNGSVDSSQAMTLGTMANESQQTCQHVKTDTTNSQCVVSSSNNNTSSEVVTKSALGPRILLVEDNKINVMVTQSMMKRLGYSMDVVNNGVEALRAVQRHTYDVILMDVYMPVMNGLQTTKLIRSYEETGNWEAAREAGIEQCSPPNSNECSVPPKNRIQIIAMTANTMSESAEECYATGMDSFVSKPVTFQKLKDCLEQHLSIGRGAVRERKRVYIEDHAPFVILQEISSSQ 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1235 1081 MobiDBLite consensus disorder prediction 812 840 - -
Aed6g1235 1081 CDD REC_hyHK_CKI1_RcsC-like 908 1046 - -
Aed6g1235 1081 SUPERFAMILY CheY-like 906 1053 IPR011006 -
Aed6g1235 1081 Gene3D - 476 723 IPR036890 -
Aed6g1235 1081 SMART HisKA_10 394 459 IPR003661 GO:0000155|GO:0007165
Aed6g1235 1081 ProSiteProfiles Histidine kinase domain profile. 401 718 IPR005467 -
Aed6g1235 1081 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 8 1051 - -
Aed6g1235 1081 SMART HKATPase_4 523 718 IPR003594 -
Aed6g1235 1081 CDD HisKA 393 455 IPR003661 GO:0000155|GO:0007165
Aed6g1235 1081 CDD HATPase_EvgS-ArcB-TorS-like 528 715 - -
Aed6g1235 1081 SMART REC_2 906 1046 IPR001789 GO:0000160
Aed6g1235 1081 MobiDBLite consensus disorder prediction 564 616 - -
Aed6g1235 1081 Pfam Response regulator receiver domain 908 976 IPR001789 GO:0000160
Aed6g1235 1081 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 395 459 IPR036097 GO:0000155|GO:0007165
Aed6g1235 1081 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 523 716 IPR003594 -
Aed6g1235 1081 Pfam His Kinase A (phospho-acceptor) domain 396 458 IPR003661 GO:0000155|GO:0007165
Aed6g1235 1081 Gene3D - 385 457 - -
Aed6g1235 1081 Gene3D - 901 1051 - -
Aed6g1235 1081 PRINTS Bacterial sensor protein C-terminal signature 643 657 IPR004358 GO:0016310|GO:0016772
Aed6g1235 1081 PRINTS Bacterial sensor protein C-terminal signature 678 696 IPR004358 GO:0016310|GO:0016772
Aed6g1235 1081 PRINTS Bacterial sensor protein C-terminal signature 702 715 IPR004358 GO:0016310|GO:0016772
Aed6g1235 1081 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 476 717 IPR036890 -
Aed6g1235 1081 MobiDBLite consensus disorder prediction 597 611 - -
Aed6g1235 1081 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 8 1051 - -
Aed6g1235 1081 Coils Coil 94 121 - -
Aed6g1235 1081 Gene3D PAS domain 221 352 - -
Aed6g1235 1081 Coils Coil 188 215 - -
Aed6g1235 1081 ProSiteProfiles Response regulatory domain profile. 907 1050 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1235 Aed-Chr6 17126137 17133356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1235 1 1050 Histidine Kinase Gene Family AT5G10720 54.366 0.0 1042
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed6g1235 HATPase_c 3.1e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1235 - - gmx:100801640 1686.39