Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1232 ATGGAGGAGATGTCGTTTGCGGTTGCAGTGCCATTAAGAGTAGGTAATTGTAATTGTAATTCAGTCTGTGACAACCCAACCATAGTTCCCCACATGGATGTATCCAGATTTAAGCTGATGGCCGATACAGGGATGTTATCTAATTCTGTAACTAAGGTTTTCACCAAGACGGTTGCAGGTTCGGATGATTCTCATGATAGTGGCAATTTGGTGGATGAAGTTGATATTGTTGAAGTTAGGGAAGGAGAGAGTCCTATGTTGGATATGATATCCCAAAACAGAAGCACTTTGGATACTGGTGATGAAGTGTTAACCACGGAAATTGAGGAGGATTCGTTGTCGTTGGAAGGTGACCAGTTTGTTGATAGCTCATGTTCTCTTTCGGTGGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGATTCCTTCTGTTTTGATGCTACTTTGGATGTTGGAACACCGTGTTCTGCAGACGCAGAGAAGAGCATCTGTGCTGTCAATATTGTTGTTGCCAATGCTGTTGACTTGGGGGAGTCAAATGTCGACACAGATATTATGGCTGATCCTCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGACTGGAGTTAGATCTGGCCCGAAGTCTTCTGCGGTTGATCTTCATCAGTTGTCTCAGGAAAAAGGGGTGACTGGAACAGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTCTATGGATTCATATCTTTGTGTGGAAGAAGACCTGAGATGGAAGATGCGTTTGCAACTGTACCTCGCTTTCTGAAAATTCCTATTCAAATGCTAATTGGTGATCAGGTAATTGAGGGAATAAACAAGTGTTTTAGTCAGCAGATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGTTCTCAGGTTGCAAACTATTGTCGTGATCGTATCCATTTGGCCTTGGCTGAGGAAATAGAATTTGTCAAGGAAGGTCTAATCAGTGGAAGTACGGAGAATGGTTGTCAAGATCAGTGGAAAAAAACTTTCACCAATTGTTTCTTAAAGGTCGATGCTGAAGTTGGAGGGAAAGTTAATAATGAACCTGTTGCCCCAGAAACTGTTGGCTCCACTTCTGTTGTTGCTGTTATTTGTGCGTCTCATATCATAGTTGCAAATTGTGGTGACTCAAGAGCGGTTCTATGTCGTGGCAAAGAACCCATGGCATTATCAGTGGACCATAAACCTAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAAGTGATTCAATGGAATGGTCATCGCGTATTTGGTGTTCTTGCAATGTCAAGGTCTATTGGCGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTACTTTTGTTCCCCGTACAAAAGACGACGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTTATGACGAACGAAGAGGTATGTGACCTCGCTCGAAAACGAATAATTCTCTGGTACAAGAAAAATGGCTTGGAACAACAACCCTCGTCTGAAAGGGAAGAGGGAATTGATCCAGCCGCACAAGCAGCAGCAGAATACCTATCGAACCGTGCCCTTCAGAAAGGAAGCAAAGATAACATCACTGTCATTGTGGTTGATTTGAAACCCCAAAGAAAATATAAGAGCAAGACATAA 1662 0.432 MEEMSFAVAVPLRVGNCNCNSVCDNPTIVPHMDVSRFKLMADTGMLSNSVTKVFTKTVAGSDDSHDSGNLVDEVDIVEVREGESPMLDMISQNRSTLDTGDEVLTTEIEEDSLSLEGDQFVDSSCSLSVVSENSSVCGEDSFCFDATLDVGTPCSADAEKSICAVNIVVANAVDLGESNVDTDIMADPLAVAVSLEEETGVRSGPKSSAVDLHQLSQEKGVTGTVGRSVFELDYTPLYGFISLCGRRPEMEDAFATVPRFLKIPIQMLIGDQVIEGINKCFSQQMTHFFGVYDGHGGSQVANYCRDRIHLALAEEIEFVKEGLISGSTENGCQDQWKKTFTNCFLKVDAEVGGKVNNEPVAPETVGSTSVVAVICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFVPRTKDDECLILASDGLWDVMTNEEVCDLARKRIILWYKKNGLEQQPSSEREEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKPQRKYKSKT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1232 553 SUPERFAMILY PP2C-like 230 545 IPR036457 -
Aed6g1232 553 ProSiteProfiles PPM-type phosphatase domain profile. 237 543 IPR001932 -
Aed6g1232 553 ProSitePatterns PPM-type phosphatase domain signature. 288 296 IPR000222 GO:0043169
Aed6g1232 553 SMART PP2C_4 225 541 IPR001932 -
Aed6g1232 553 Gene3D - 224 553 IPR036457 -
Aed6g1232 553 PANTHER ALPHABET, ISOFORM E-RELATED 102 553 - -
Aed6g1232 553 CDD PP2Cc 238 543 IPR001932 -
Aed6g1232 553 Pfam Protein phosphatase 2C 275 536 IPR001932 -
Aed6g1232 553 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 102 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1232 Aed-Chr6 17057509 17063598 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1232 1 553 PP2C-type Phosphatase Gene Family AT1G17550 46.726 3.97e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1232 K14497 - gmx:100805281 990.719