Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1227 ATGAGTGCTAAAAAGAACACATGGAAGTCTGTGGTCTTGATCCTAAGTTGTTACAAGGTTAAGTGTCCCTTGGAGGAATCAGAGAAACAGGTTTTGAAACAAGGTTCTTTCCAGAGGCTATGTCTATCTGATGTGAGCAACTCAAGCTCCACTCAGGCCATTGAAGACATTTCAATTTCCTTTGGTGGCTCAAAAAAACTCTATGCATTCACACTTGAGGAGCTAAGGGAAGCAACAAACAGCTTCTCATGGAGTAACATGCTAGGTGAAGGAGGGTTTGGACCTGTGTACAAGGGTTTTGTTGATGACAAACTTAGGTCTGGTTTGAAGGCTCAGACTGTTGCTGTGAAAAGATTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGAACTTTGGATGTTCTGCTCTATATGTGATCAAGTGTAATTGTTTCAAATCTATATGA 450 0.4222 MSAKKNTWKSVVLILSCYKVKCPLEESEKQVLKQGSFQRLCLSDVSNSSSTQAIEDISISFGGSKKLYAFTLEELREATNSFSWSNMLGEGGFGPVYKGFVDDKLRSGLKAQTVAVKRLDLDGLQGHREWLNFGCSALYVIKCNCFKSI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1227 149 PANTHER OS01G0588500 PROTEIN-RELATED 20 131 - -
Aed6g1227 149 PANTHER KINASE 1B 20 131 - -
Aed6g1227 149 SUPERFAMILY Protein kinase-like (PK-like) 61 125 IPR011009 -
Aed6g1227 149 Gene3D Phosphorylase Kinase; domain 1 41 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1227 Aed-Chr6 17017062 17020228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1227 45 130 Trihelix Transcription Factor Family AT1G68690 44.186 1.47e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1227 - - gmx:100802636 247.284