Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1216 ATGGAGAAGGAACCCAAAAATGCTCAGTTGACAATCTTCTATTCTGGGCAAGTTGTTGTGTTTAATGATTTTCCGGCTGATAAAGTGGAGGAGTTAATGTCTTTGGCAATGGCCACCAAGGGAATATCCCAATCCCACACCCAGAACTCCTCTGTACATGCACATGCTCACACTCATAACCATCCTTCAAGTATCACCCCTCAAGCACCATCCACACCCATATCTACACCCATTGTTAAAGAATTGCTGCCAAATCTCCATATCAAACAAACAATCCTATCTCTGCTCCTAATAAGCCGGCTGATCTAA 309 0.4337 MEKEPKNAQLTIFYSGQVVVFNDFPADKVEELMSLAMATKGISQSHTQNSSVHAHAHTHNHPSSITPQAPSTPISTPIVKELLPNLHIKQTILSLLLISRLI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1216 102 ProSiteProfiles Tify domain profile. 3 38 IPR010399 -
Aed6g1216 102 PANTHER PROTEIN TIFY 10A 3 72 - -
Aed6g1216 102 SMART tify_2 3 38 IPR010399 -
Aed6g1216 102 Pfam tify domain 4 36 IPR010399 -
Aed6g1216 102 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 3 72 IPR040390 -
Aed6g1216 102 MobiDBLite consensus disorder prediction 44 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1216 Aed-Chr6 16886901 16887743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1216 4 80 Tify Gene Family AT1G19180 40.244 6.96e-11 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed6g1216 tify 2.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1216 K13464 - gmx:100778169 106.686