Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1212 ATGTTAGGCACTCCCCACACCCTTGTTATCCTCATCTTCTTCCTCTTCTCTCCAACTACCCACTCCCTCTTCTTCAACATAACCAACTTCGACGACCCTGCAGTTGCATCCTCCATATCCTACGAGGGTGACGGAAGATCCAACAACGGCTCTATCGACCTCAACAAAGTCAGCTACTTCTTCCGCGTCGGCAGAGCCATCTACTCCCAGCCCCTCCGCCTCTGGGACCCCTCCTCCACCCTCGCTGCCGACTTCGCCACCAGCTTCGCTTTCTCCATCGAGAGAGTAAACTTCAACGACTCCTCCTACGGAGACGGCTTCGCTTTCTACTTAGCCCCGTTGAATTACCGCATCCCACCGAACTCCGCAGGCGGCACCTTCGCCCTCTTCAACGCCACCACCAACAGCAACCTCCCCGAGAATCACGTCGTCGCCGTTGAGTTCGACACCTTCGTGGGATCCACCGACCCGCCACAGAAACACGTGGGGGTAGACGACAACTCCCTCACCTCCGCCGCCTTCGGCAGCTTCGACATCGACAACAACCTCGGCAAAAAATGCCACGCGCTCATCACCTACACCGCCTCCACTCAAACCCTCTTCGTTGCGTGGTCCTTCAAAGGAAAACCAAACACAAACAACAACGACAACAACTCTTCTTTCTCTTACCAGATAGACCTCAAGAAAATCCTCCCGGAATGGGTCAACATTGGCTTCTCAGCCTCAACCGGACTCTCCACCGAGAGAAACACCATCTATTCATGGGAATTCACTTCATCTCTAAACGACTCAAGTTTCGCCGAGAACGTGAAACTAAAACACAAAGGCTCAAAGCTCGTGTTGATACTAGCCATTCTTTGTCCTCTGGTGTTACTCTTTGTAGCGGCCAGCATAGTTGTATTATTGATAAGGCAAAAGAGACAAAAACAAAAGGACGACTGCATGTTATACGAAGTCGGCGACGGAGAAGATCCCGCATTTAGTAAGTTCGATCTGGACAGAGGAACCTTCCCGAGAAGATTCGAGTACAGAGAACTCGCGGAATCCACCAACGGTTTCGCCGAGGATAGAAAGCTCGGGCAGGGAGCTTCAGGGCAGGTCTACAAAGGGGTCCTGAGCTACCTCGGAAGAGTGGTGGCGGTGAAGAGAATCTTCGCGGACTTCGAAAACTCGGAGAGAGTCTTCACCAACGAGGTGAGAATAATAAGCCGTTTGATTCACAAGAACTTGGTCCAATTCATAGGGTGGTGTCACGAGGAAGGAGAGTTTCTATTGGTATTCGAGTACATGCCAAACGGGAGCCTCGACTCTCATCTCTTCGGGAACAAGAAAGTGTTGGAGTGGCACGTGCGGTACAAGATCGCGTTAGGCGTTGTCACTGCGCTTCATTATCTCCACGAGGACGCGGAACAGTGCGTGCTGCACAGAGATATAAAATCGGCAAACGTGTTGCTGGATACAGAGTTCAACACAAAAGTTGGCGATTTCGGCATGGCGAAGCTGGTGGATCCGAGGCTGAGGACTCAGAAAACCGGAGTGGTGGGAACTTACGGATACTTAGCGCCGGAGTACGTAAACGTCGGGAGGGCGAGTAGGGAGTCGGACATCTACAGCTTCGGGGTCGTGGCGCTGGAGATTGCGAGCGGGAGGAGGACTTTCCGGGACGGCGAGTTTCATGTCTGTTTGATGAATTGGGTTTGGCAGCTTTACGTTGAGGACGAGATTCTGAGGGCTGTGGACGAGAAACTGAACAATGAGTTTGATTTGGAGGAAATGAGGAGCTTGCTTGTGGTGGGGCTGTGGTGTACGAATCCGAATGATAAAGAGAGGCCTAAGGCGGCGCAGGTGATTAAGGTTTTGCGGCTTGAGGCGCCTTTGCCGGTGCTGCCGCTGGATATGTATGAACGGGCTCCGCCGGTTGAGATGATTAGGATGCCACATCATCAAAATCAGAATAATCATTCGGGGCAGTTGCCACCTATTACTACTAGTCTTGTCAGTGTTGGACGATGA 2013 0.5211 MLGTPHTLVILIFFLFSPTTHSLFFNITNFDDPAVASSISYEGDGRSNNGSIDLNKVSYFFRVGRAIYSQPLRLWDPSSTLAADFATSFAFSIERVNFNDSSYGDGFAFYLAPLNYRIPPNSAGGTFALFNATTNSNLPENHVVAVEFDTFVGSTDPPQKHVGVDDNSLTSAAFGSFDIDNNLGKKCHALITYTASTQTLFVAWSFKGKPNTNNNDNNSSFSYQIDLKKILPEWVNIGFSASTGLSTERNTIYSWEFTSSLNDSSFAENVKLKHKGSKLVLILAILCPLVLLFVAASIVVLLIRQKRQKQKDDCMLYEVGDGEDPAFSKFDLDRGTFPRRFEYRELAESTNGFAEDRKLGQGASGQVYKGVLSYLGRVVAVKRIFADFENSERVFTNEVRIISRLIHKNLVQFIGWCHEEGEFLLVFEYMPNGSLDSHLFGNKKVLEWHVRYKIALGVVTALHYLHEDAEQCVLHRDIKSANVLLDTEFNTKVGDFGMAKLVDPRLRTQKTGVVGTYGYLAPEYVNVGRASRESDIYSFGVVALEIASGRRTFRDGEFHVCLMNWVWQLYVEDEILRAVDEKLNNEFDLEEMRSLLVVGLWCTNPNDKERPKAAQVIKVLRLEAPLPVLPLDMYERAPPVEMIRMPHHQNQNNHSGQLPPITTSLVSVGR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1212 670 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Aed6g1212 670 Pfam Legume lectin domain 24 265 IPR001220 GO:0030246
Aed6g1212 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Aed6g1212 670 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Aed6g1212 670 PANTHER - 8 635 - -
Aed6g1212 670 Gene3D - 21 274 - -
Aed6g1212 670 PANTHER PUTATIVE-RELATED 8 635 - -
Aed6g1212 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 261 IPR013320 -
Aed6g1212 670 CDD lectin_legume_LecRK_Arcelin_ConA 25 261 IPR001220 GO:0030246
Aed6g1212 670 Pfam Protein kinase domain 354 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1212 670 SUPERFAMILY Protein kinase-like (PK-like) 337 634 IPR011009 -
Aed6g1212 670 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Aed6g1212 670 ProSiteProfiles Protein kinase domain profile. 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1212 670 Gene3D Transferase(Phosphotransferase) domain 1 430 624 - -
Aed6g1212 670 MobiDBLite consensus disorder prediction 648 670 - -
Aed6g1212 670 SMART serkin_6 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1212 670 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1212 Aed-Chr6 16855436 16857448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1212 6 633 Receptor kinase-like Gene Family AT5G10530 44.044 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed6g1212 Pkinase 6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1212 - - gmx:100791220 1130.93