Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1203 ATGGCTGCACAACATGATAATGATCCTAGAAACATGGTTTCTATTTCAAGGATTGTGTCTGTGCATCCCAAACTTGTGCAACCTCATCAAAGGGTTTTGGCCCTTTCAAACTTGGATAGGCAGTGTCCAAGCCTCATGCACTTGGTGTTCTTTTACAACAATAATAACCAAACTTTGAAGGACTTGTCCCTCAATTCAGTGTTCTCCAGCTTGAAATCTGGCTTGGAAGAGACCTTGACTCTGTGGTACCCTAGTGCTGGTAGGCTTAGACCAAATCAAAGTGGTGATGGCAAGCTCAACCTGTGGTGCAACAACCAGGGTGCAGTTCTGGCAGAGGCTGAAACCGCTGCTAAAATATCACAACTTGGAAACCTCTCTGAGTACAATGAATTCTTTGAAAAGCTGGTTTATAAGCCAGCTTTTGATGGGAATTTCTCAAACATGCCTCTGATTGTTGCTCAGGTTACTAAATTTGGTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCATTATTTGATGGACCAGCAACCTATGACTTCTTGTATGAATGGGCCTCAAATTCTGAAATTGTGAAAGGAAGAAGAAGCAGATCTGATGATGAGCTTCCAAAACCAGTGCATGAGAGAGGGATACTTCTGAGTGGTAGTAGTCTTCAATCCCCAAAAGGGACTACAAATTTTCCATCAGACTCAAGTTTAAATGCTAAGCAAGCAATTAGGGCAATGGCAATTGATCACTTGTATCAACTTATAATGCAAGCAGCAGCTAGTGGAGTACAAAAGGGGTTTCCTATGCAAATTGGAGGACCCTCTAAGCCAAAGAAGTGTGTTCTTAAAACCTATCATCTTTCAGGTGTAATGATAGAAGACTTGAAAAGGAAACACTTTCCCATGCAAAGAGGTTCTCTTCCTTTCTCAACCTTTGAGGTTCTTGCTGCTCACCTTTGGAAGAAAGAGAAGCAAGTATGCCTCCAATTCGCAGTTGACATAAGGAACAAAATGACACCACCATTGCCAAAATCCTTCAGCGGAAACGCCTACGTTCTCGCCTCCATCATGATGCCAGTGTCACAATTGGAACAAACAAGCCACGAACTCATCGTTCACAAAATAAGAGAAGCCAAAAACAGCGTAAACCATAACTACGTGAAGGCCTACGTTGATGCCCTAGACCAACAACAAGGTGGTTCCTCTTCTTCTTCTTCTTCACTTCCTCCACTTAAGGAACTAACTTTGGTCTCCGATTGGACGAGAATGCCCTTTCACAACATCGAGTTCTTTCGTGGAAAAAAAGCGACCTATGCATGCCCTCTGGTCACTCCTGTTCCTCAGGTTGCGTACTTCATTCAAAGCCCTAGTGGTGATGACAACATGGGCGTTGACGTTAGGATTGGGTTTGAAGAAGAGGGCAATGTTGTAAGTGCTTTTAATGAGTGTTTTTTTAGCAACGCGTGA 1461 0.4305 MAAQHDNDPRNMVSISRIVSVHPKLVQPHQRVLALSNLDRQCPSLMHLVFFYNNNNQTLKDLSLNSVFSSLKSGLEETLTLWYPSAGRLRPNQSGDGKLNLWCNNQGAVLAEAETAAKISQLGNLSEYNEFFEKLVYKPAFDGNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYEWASNSEIVKGRRSRSDDELPKPVHERGILLSGSSLQSPKGTTNFPSDSSLNAKQAIRAMAIDHLYQLIMQAAASGVQKGFPMQIGGPSKPKKCVLKTYHLSGVMIEDLKRKHFPMQRGSLPFSTFEVLAAHLWKKEKQVCLQFAVDIRNKMTPPLPKSFSGNAYVLASIMMPVSQLEQTSHELIVHKIREAKNSVNHNYVKAYVDALDQQQGGSSSSSSSLPPLKELTLVSDWTRMPFHNIEFFRGKKATYACPLVTPVPQVAYFIQSPSGDDNMGVDVRIGFEEEGNVVSAFNECFFSNA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1203 486 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 485 - -
Aed6g1203 486 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 10 485 - -
Aed6g1203 486 Pfam Transferase family 18 469 - -
Aed6g1203 486 Gene3D - 13 227 IPR023213 -
Aed6g1203 486 Gene3D - 257 481 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1203 Aed-Chr6 16776856 16781183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1203 71 466 Monolignol Biosynthesis Gene Families AT5G48930 23.058 7.77e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1203 K15400 - gmx:100779295 780.785