Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1198 ATGGAGGGTCATCAAGGACTAATTAGCATGAAGGAGCCATACTTTTGTGACAGACCAAGTACTCCACTTCAGCATCCACATGAGAAGAAGAAGAAGAAAGAGGATCATCAAGAAAAAAAGGAGCCAACGAAAAAGCATGTTATTACCCTATTGGATCTGAATATTAATGTCTTAGGCTGTGGTGATGATGATTCAGAAGAACTACCAGAACTCAACCTCATCACTTGTTTGGATGTACTAGGCTCATCATCCAACACCAACAATGCAAATTCGTCATCAGAAACGACGACGACGACGACAACAAACCCTCTTGGTAATAATAATTGTTCTAACTCTGAAGCAGCTGAGCCAAGAGTGTTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGCTCACAAGCACTAGGAGGCCATCAAAATGCACACAAGAGAGAGAGATCAATTGCAAAGAGAGGCCACAACAGGTTTGAAATGGTTAATAGTAGTAGTACCATGCTGAATTCTTCTTTAGCCAGTAAAGAAATCAGTGGTGGAACTAGTTTGAAGCAAGAAGAAATTAAGCACCTTGATTTAAACCTCAACCTCAAGCTCTGA 594 0.4091 MEGHQGLISMKEPYFCDRPSTPLQHPHEKKKKKEDHQEKKEPTKKHVITLLDLNINVLGCGDDDSEELPELNLITCLDVLGSSSNTNNANSSSETTTTTTTNPLGNNNCSNSEAAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHNRFEMVNSSSTMLNSSLASKEISGGTSLKQEEIKHLDLNLNLKL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1198 197 MobiDBLite consensus disorder prediction 84 110 - -
Aed6g1198 197 MobiDBLite consensus disorder prediction 22 43 - -
Aed6g1198 197 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 165 IPR044246 GO:0009788
Aed6g1198 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 147 IPR013087 -
Aed6g1198 197 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 165 - -
Aed6g1198 197 MobiDBLite consensus disorder prediction 1 43 - -
Aed6g1198 197 Gene3D Classic Zinc Finger 89 179 - -
Aed6g1198 197 ProSitePatterns Zinc finger C2H2 type domain signature. 122 142 IPR013087 -
Aed6g1198 197 SUPERFAMILY beta-beta-alpha zinc fingers 117 147 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1198 Aed-Chr6 16726914 16727834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1198 113 162 C2H2 Transcription Factor Family AT1G80730 74.000 2.81e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed6g1198 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1198 - - gmx:100820461 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1198 6 16726914 16727834 Aed4g1750 4 21870684 21871418 PCT