Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1187 ATGAAAACGAAACTTCTTCTTATGCTTCTCATGCTCCTCCTTATTCTCCACACACCCACTTGGACTCTTGCCTCTGCTTCACACCCTCTTGCTCCCTCTCCTCAAGCTCCACCCTTTTCTTCAATGTCTGCTTCCTCTCCAGGAATTGTGATGGGAGATGAGAAGCAACAACACATGGATTCACACAAGAAAATGGTAATTGCTATTGCTGTAGCCAGCACTTCACTTGGTGCAATCATTTTGGGTGTGTTGTGCTTCTGGATTTACTACACCAAGTACCCTTCAAAATCCAAAGGGAAAAACGTTCAAAGATCAGATGCTGAAAAAGAGCTGTCGTCAGCACCATTTTTGAGTAAATTCAGCTCTATAAAGCTGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGACTATAAGCAAATAGAAAAATCCACCGGAAATTTCAAGGAAATTAACATCTTGGGTGAGGGTGGTTTTGGATGCGTCTACAAGGCTCATTTGGATGATAATTTAGATGTTGCTGTTAAAAAATTGCACTGTGAAAATCAGTATGCTGAGCAAGAATATGAGAACGAGGTGGATTTGTTAAGTAAAATTCAACACCCAAATGTAATTTCTCTGCTGGGTTGTAGCAGTAATGAGGATTCAAGGATTATTGTCTACGAATTGATGCATAATGGATCATTGGAAACTCTATTACATGGACCTTCTCATGGCTCGGCATTGACTTGGCATTTGAGGATGAAAATTGCCCTTGACACAGCAAGGGGATTAAAATACCTGCATGAGCACTGTTACCCTTCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATACAAAGTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACCAATGGGTCCCAGAACAAGAACAACCTCAAGCTTTCAGGCACTTTGGGTTACGCCATGCCACAGCTCACAGACAGGTCTAAGCTTCCAAACATCGTGGATCCTGTAATTAAGAATACAATGGATCCCAAACACTTATACCAGGTTGCTGCTGTGGCCGTGCTATGTGTGCAACCAGAGCCAAGTTACCGTCCTCTGATTGCAGATGTTCTCCACTCACTGATCCCTCTTGTGCCTGTGGAGCTTGGAGGAACACTCAAAGTTGCACAACTGCCACAGCAAGTCTTACCTGAGGATTCTAGTCAATGA 1194 0.4229 MKTKLLLMLLMLLLILHTPTWTLASASHPLAPSPQAPPFSSMSASSPGIVMGDEKQQHMDSHKKMVIAIAVASTSLGAIILGVLCFWIYYTKYPSKSKGKNVQRSDAEKELSSAPFLSKFSSIKLVGKKGCVPIIDYKQIEKSTGNFKEINILGEGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQEYENEVDLLSKIQHPNVISLLGCSSNEDSRIIVYELMHNGSLETLLHGPSHGSALTWHLRMKIALDTARGLKYLHEHCYPSVIHRDLKSSNILLDTKFNAKLSDFGLAITNGSQNKNNLKLSGTLGYAMPQLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLKVAQLPQQVLPEDSSQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1187 397 SUPERFAMILY Protein kinase-like (PK-like) 129 369 IPR011009 -
Aed6g1187 397 ProSiteProfiles Protein kinase domain profile. 147 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1187 397 PANTHER BNAC02G46490D PROTEIN 313 385 - -
Aed6g1187 397 PANTHER BNAC02G46490D PROTEIN 7 313 - -
Aed6g1187 397 Gene3D Phosphorylase Kinase; domain 1 109 222 - -
Aed6g1187 397 Gene3D Transferase(Phosphotransferase) domain 1 223 325 - -
Aed6g1187 397 PANTHER OS01G0750732 PROTEIN 313 385 - -
Aed6g1187 397 PANTHER OS01G0750732 PROTEIN 7 313 - -
Aed6g1187 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Aed6g1187 397 SMART serkin_6 147 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1187 397 Pfam Protein kinase domain 147 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1187 397 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1187 Aed-Chr6 16653206 16659062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1187 24 303 Receptor kinase-like Gene Family AT1G80640 46.667 1.89e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Aed6g1187 Pkinase 4.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1187 - - gmx:100785380 649.047