Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1154 ATGTCTAAAGAAGTTATTGCTACTCAATCGGCTACTCCTTTCGAGTATGAGATCTTGGATAGTGATGCTGAAGTCCTTAGAACAGTTAGAGCCTCATCCAACCGCGCAAATCCATGGATTGAACCTGAAAGGTTGAAACTTAGACACCGAATTGGCCGAGGCCCCTTTGGGGATGTCTGGCTAGCAACTCATCATCAGTCGACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTGCATCCAATCAGAGAGGATCATGTGAAGATCGTATTAGAGAAGTTCAATGAATTATATTCTAAGTGCCAAGGAGTTCCCAGCATTTCCTGGCTACATGGAATTTCAGTCTTAAATGGGAGGATATGCATCATTATGAATTTGTACGAGGGTTCAATTGGTGACAAGATAGCAGGACTCAAAGAAGGAAGGCTTTCATTGCATGATGAACTTCACTCTAAAGGGATTTTCATTCTCAACCTTAAACCGTTTAATGTTCTTCTCAATGATAATGATCAAGCAATTTTAGGAGATGTCGGTATTCCTAGCCTTTTGCTTGGCTCATCATTTCTGAGCACAGAAATGGCCAAGAGGCTCGGAACTCCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCCTTTGAAACAGATTCTTGGGGATTCGCGTGCACCATTGTTGAAATGTTGACCGGTAATCAACCTTGGTATGGATGTCCTTTTGGCAGAATATACCAGTCGGTTGTTGAAAAGCATGAAAAACCCATTATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATATCCTTAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCGTTAATGGTAGATATTATGAGTGTCTTTCAAAGTGCTCTGAATGAACTGGCCAATGATGGAGAATGGAGATATCTAGGAAATGTGAAAGTCCTTCCAAAATCAGTTAGCACTGACTACACAGAGTGGTTCGTCTCAAAGGATCATCTTCAGGTGGGCGACATGGTCCAATCTAGAAAGCCTTCCAATTCATGCAGACCTCAAAACATGGACATCCCAGAAGGAACTGTTGTCGGTTTAGAGCGCAATGCAGAACACGGATTCGCTCTCGTGAGGGTCCACGGCATTCATGACCCTATTAGAATTCATGTGTCAACTCTTGAACGTGTCACATTTGGCTTGGTAGCTGGCGATTGGGTACGGATAAAGGAAGCAAACGAGAAGCACTCGCCTGTGGGCATTCTACATGCTGTCAGCCGCAACGGTAGGGTGACAGTTGGTTTTCTCGGGTTGCAATCTCTCTGGAACGGAAACTCTTCCGAACTTGAAATGGTGGAACCATACTACGTTGGCCAGTTCGTCCGGCTCAAGGACACCACTGTCTCAAGTCCTCGATTCGAATGGCGCCGCAAAAGGGGTGGCGGCGGCGCCTCGACCGCTGGCAGGATCTTGTGGATTCTACCAAATGGATGTTTGGTTGTCAAGTTCCCAGGAATGCTCCCTTTTGGAAATAATGAACCTACCACCTACTTGGCTGATCCCTCTGAGGTTGAAGTAGTTGAGTTCAACACTTGTCATGGGATGATGGAGAAGTATCAACATATGGAGGATCATCACTGGGCAATTAGACCCGTTCTTATTGCAATTGGTCTATTCACTGCTCTCAAACTAGGCATATCAATTGGAAAGAAAGTGAGGAGGAACAACAACAACAAGGTCATTGCAATAGAAAGTGAAACTCAATACCTTGATGGTCAAAATCAAAATGCCACCTCTGCTACAACAACAACTACAAAGAGATCTTCCACTTCCAGTGCTGCAATACCAGTTAGCACAATGTGGGTTCCTGCAGTTGCTAACATGCTTTTTAAGGAAGATGTTTCTGTTACCTCGTCCAATGGTCGGTAG 1926 0.4444 MSKEVIATQSATPFEYEILDSDAEVLRTVRASSNRANPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLHPIREDHVKIVLEKFNELYSKCQGVPSISWLHGISVLNGRICIIMNLYEGSIGDKIAGLKEGRLSLHDELHSKGIFILNLKPFNVLLNDNDQAILGDVGIPSLLLGSSFLSTEMAKRLGTPNYMAPEQWEPEVRGPISFETDSWGFACTIVEMLTGNQPWYGCPFGRIYQSVVEKHEKPIIPSGLPSSVENILSGCFEYDLRNRPLMVDIMSVFQSALNELANDGEWRYLGNVKVLPKSVSTDYTEWFVSKDHLQVGDMVQSRKPSNSCRPQNMDIPEGTVVGLERNAEHGFALVRVHGIHDPIRIHVSTLERVTFGLVAGDWVRIKEANEKHSPVGILHAVSRNGRVTVGFLGLQSLWNGNSSELEMVEPYYVGQFVRLKDTTVSSPRFEWRRKRGGGGASTAGRILWILPNGCLVVKFPGMLPFGNNEPTTYLADPSEVEVVEFNTCHGMMEKYQHMEDHHWAIRPVLIAIGLFTALKLGISIGKKVRRNNNNKVIAIESETQYLDGQNQNATSATTTTTKRSSTSSAAIPVSTMWVPAVANMLFKEDVSVTSSNGR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1154 641 MobiDBLite consensus disorder prediction 592 611 - -
Aed6g1154 641 Gene3D Transferase(Phosphotransferase) domain 1 146 321 - -
Aed6g1154 641 PANTHER OS06G0639500 PROTEIN 1 635 - -
Aed6g1154 641 SUPERFAMILY Protein kinase-like (PK-like) 42 297 IPR011009 -
Aed6g1154 641 Gene3D Phosphorylase Kinase; domain 1 9 130 - -
Aed6g1154 641 ProSiteProfiles Protein kinase domain profile. 45 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1154 641 Pfam Protein tyrosine and serine/threonine kinase 45 294 IPR001245 GO:0004672|GO:0006468
Aed6g1154 641 PANTHER OS06G0639500 PROTEIN 1 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1154 Aed-Chr6 16235239 16241829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1154 153 339 MAP Kinase Kinase Kinase AT1G05100 26.341 2.12e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Aed6g1154 PK_Tyr_Ser-Thr 3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1154 - - gsj:114393396 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1154 6 16235239 16241829 Aed6g1154 6 16235239 16241829 ECH
Aed4g1784 4 22133378 22136659 Aed6g1154 6 16235239 16241829 ECH
Aed6g1154 6 16235239 16241829 Aed4g1784 4 22133378 22136659 PCT