Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1151 ATGAATTGGATTGACAGGGATGGAATTTTGCTTGAGTCATACAACGGAGAATTTGGCTTTGGCCTAGTGACCACTGCAAATGACACTACCTTGTATCTACTAGCAGTAATCCACAGGTACACCAACAAGGTGGTTTGGGTTGCTAATAGGGCACTTCCTGTTTCCAATTCTGATAAATTTGTGTTTGATGAAAAGGGCAATGTCATTTTGCATAGAGGAAAAAGTGTGGTTTGGTCTACATATACAAGTGGAAAGGGGGTTTCTTTGATGGAATTGAGGGACACTGGAAACTTGGTTTTGCTCGGGAATGATAGTGGTGTAATTTGGCAAAGTTTCAGCCACCCTACAGATACCTTGTTGCCAAAGCAAGACTTCACTGAGGGAATGAAACTTGTCAGTGAGCCTGGTCCTAACAACTTGACCTATGTTCTTGAGATTGAAACAGGCAATGTCATTCTCAAAACTGGTTTGCAAACTCCACAGCCTTATTGGTCTTTGAAGACAGATAGCCGCAAGATCATCAATAAAAACGGTTATGTGGTGGCTTTGGCTATCCTTGATGAAAATTCATGGAGGTTCTATGATGAGACTAAGTCCTTGTTGTGGGAATTTGATTTTGCTGGAGAAAAATCAGATGCAAATGCCACTTGGATTGTAGTTTTGGGAAGTGATGGCTCAATTGGTTTCTCCAAACTTCTAATTGGAGGGACAATTGTTGCTTCACCAACAAGAATACCACAAGATTCTTGCAGCACACCAGAGCCTTGTGATCCATATAACATATGCACTGGTGAAAAAAAGTGTACATGCCCTTCTGTTCTTAGCTCTAGTCCTAGTTGCAAACCCGGGTTTGTCTCTCCTTGCAACTCGAAAATCGCCACTGAGCTTGTCAAAGCTGATGATGGAATCAACTACTTTGCACTTGGGTTTGTTGCACCTTCTTCAAAGACTGATTTGATTGGTTGCAAAGCCTCTTGCAGTGCAAATTGCTCATGCCTTGCTATGTTCTTCAACAGCAGTTCAGGGAACTGTTTCCTGTTGGATAAAGTAGGAAGCTTTCAGAAATCCGGTGAGGATTCTGGTTTAGTATCCTACATTAAGGTGGTGTCTAGTGAAGGAGACACTAGAGACATTGGAAGCAGCAAAATTCAGACAATAGTTGTTGTGATCATTGTCATGGTAACATTGTTTGTGATTTCTGGACCATCAGATTGTAACAGTGAAGCCAATCTCTCTGCCGTTAGGCTTTCAGGGCCAAGATAG 1263 0.4196 MNWIDRDGILLESYNGEFGFGLVTTANDTTLYLLAVIHRYTNKVVWVANRALPVSNSDKFVFDEKGNVILHRGKSVVWSTYTSGKGVSLMELRDTGNLVLLGNDSGVIWQSFSHPTDTLLPKQDFTEGMKLVSEPGPNNLTYVLEIETGNVILKTGLQTPQPYWSLKTDSRKIINKNGYVVALAILDENSWRFYDETKSLLWEFDFAGEKSDANATWIVVLGSDGSIGFSKLLIGGTIVASPTRIPQDSCSTPEPCDPYNICTGEKKCTCPSVLSSSPSCKPGFVSPCNSKIATELVKADDGINYFALGFVAPSSKTDLIGCKASCSANCSCLAMFFNSSSGNCFLLDKVGSFQKSGEDSGLVSYIKVVSSEGDTRDIGSSKIQTIVVVIIVMVTLFVISGPSDCNSEANLSAVRLSGPR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1151 420 SUPERFAMILY alpha-D-mannose-specific plant lectins 40 168 IPR036426 -
Aed6g1151 420 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 401 - -
Aed6g1151 420 CDD B_lectin 4 115 IPR001480 -
Aed6g1151 420 Gene3D - 6 114 IPR036426 -
Aed6g1151 420 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 401 - -
Aed6g1151 420 Pfam D-mannose binding lectin 44 125 IPR001480 -
Aed6g1151 420 ProSiteProfiles Bulb-type lectin domain profile. 1 113 IPR001480 -
Aed6g1151 420 SMART blect_4 2 115 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1151 Aed-Chr6 16206081 16208393 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1151 - - gmx:100787500 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1151 6 16206081 16208393 Aed6g1151 6 16206081 16208393 ECH
Aed4g1793 4 22186865 22190345 Aed6g1151 6 16206081 16208393 ECH
Aed6g1151 6 16206081 16208393 Aed4g1792 4 22183095 22185548 PCT