Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1135 ATGGATTCTCCACAACCTTCCAAGAACAACAGTGGCAGTTCTTCTGCCTCCACTCTCAACAACAACAACAACATCAACGATGCGAGTTTATCGGAATCCCCTCAAGTACAAGAATCCCCCTTTCTTAGTTTTGTAAAGACTTTATCTCCAATACACACCAAGGTTTGTCATATGGCACAAGGTTTTCAAGGGCTAAGTTCTCCACCTCTTGTATTCAAGTCTCCACGTATTAGTCACCGTGAAACACAGTTCATGGAAAGGCCTCAAGGCACTCAGTCACTTGGTGGCGTAATATCTCAAAGTGTAAATGAAGGCAACAGGCTTGGTGAAGCTCGTGAAGATTCCCGGAAGTGTTATTCTCAGCAGCCTCTGCCAGAGAGGTTTATAATTGATACTCAGAAGGTTTTTGATCCCAATAATGATGCAAATACTCAATACTACAGTTCTCCATTGTGTATTGATAAATATTTGGTGGATCCTGGGGATATTGATCAAATGTATTCAGCCAACCAGGATGTGGAACAACAATCTACAGATGCGGCTGAAACATCACTAAGTGACCAAACTCATTCAGAGAAAAATATATTAAATTTTGACAGGAAAGATGGGCCTGGTGATAAAGCAGAAGAATCTTTGTCTTTGTCTGAGGATTCTAACAAGGTTCATCAAGAAGAGGCAGCATATGGTGAAGAACCTGAAAATATGGAAGGGGAGAAAAACGATGTTGAATGGGCTTCTCAGGAACCTGCAAATTTAGAGGCCATTTTTCATGAACGATATAGTCATGATCCACTTCCTCAGCTTGTGGATAATTATCAATGGGATCATAAAAATGGTACACCTCAGTGGATGCCTGGTCCTCTGCAGGATGTTAAAGGATGTGAAGATTACATTGAGATGGTGCCAACCTCACATGTAACTGCAGAGAATATCTTGCAAGATGGTTCTGAGGCTACTCTAAAGTACCATGGCATTCGTAGACGCCGTCTAAAATTTGGGGAAGCTGCCTCCAATGCTCTTGGAAGTAATATCAAACTGAATGCAACTACAAACAAAATGAAAATGGTCAATCCGTCTGAACTTGTCACTTCCTTGTGTCCTCAGCGAGGTAGTGGAAACTTACCTTTGACAGGTCCCAAGCCACCAGGTATTGGGTTGCATTTAAATAGTATCATAAATGCTATTCCAACTGGTCAGGCTGCAATTACGGGTGTGAGATTATCAGATGGTTCACAGGGGATGAATTCCACATCTTCAATAAGGTTACAAAGAATGGAGAATGTGAAGCGATCCATACTTTCATCTAATGTTGATGGGCAATCATTACTTGATACAAGAAATGAGAGCCATGAAATTGATGATACAATAGCTACAGATGCTGGAAATTCTGAGGACTTCAACCAACCTCCTAGCCCCTGCAAGAAAAAGAAGAAAACATCAGTCACTGCTGATGACAACGGCTGTAAACGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTTTACTGTGAGTGTTTTACCGCTGGAATCTACTGTACCGATCCTTGTGCTTGCCTAGGCTGCTTAAACAGACCAGAACATGCAGAGACAGTTGTCGAGATTAAACAACAAATTGAATCCCGTAATCCAATTGCATTTACTCCCAAGATTGTACAGACTACCACTGATATTTCGTCAAATATGGTGGATGATACAAATCTGACCACACCATCATCGGCAAGGCATAAAAGAGGTTGCAATTGCAAAAGGTCAATGTGTCTGAAAAAGTATTGTGAATGCTATCAGGCTAATGTTGGGTGCTCAAGTGGATGTCGATGCGAGGGATGTAAGAATTCCTACGGCAAGAAAGAAGATTATGTTGCATTTGAACATACTTCGAGAAAAGAAAGGATTAGCAGTATTGTTGAAGAAGGATCACACTACACACTTAACAATAAACTGGAAATTGTGGCTTGCAAGACTGTTTATGATCTACAGCGCCTCTCACCTATAACGCCATCATTACAATGCTCTGACCAAGGCAAGGAGGCTGCAAAATCCAGAGTTATTTCTGGAAACTATCTACCTTCCCCCGAATCTGATGTCAATAAGTTTGCATATTGTGCTAACTACACTGAATCTTCTGAAAATTTGCACAGCAATCATGAACTCCTGGAAACAAATGAGATGTTGGGAAGTGTCCCCTGTGATTCACAAATTGAATGCAACAATGCTATCCCACTTCAGCTTACTCCTCCTCTGCCTAATCCTGAGCAATCTAGCACTTCATCATTCCCATCTGTAGCAAGTGAGTGGACAAATATTCCTCAATCCCGACTCTCCTGTGGATCTATTCGCCAGTTACCTGGTGGCTCTCTTCGTTGGCGTAGTTCCCCACTTACCCCAAGCACTAGAGTAGTAGTAGGCGAAGCACAATATTTACAGCGTTCTGAATCAGATAGCAGGCTCTATGACATTCTAGAAAATGAAACCCCTGATATACTGAAAGAAGCAGCTTTGACTCCTATGACGTCCGTCAAAGTAAATTCCCCAACCCAAAAACGTGTTTCTCCTCCCCAGAGTCGTCATCTTGGGATTGTTGGATCAAGCTCCTCCGGAGAATTGAGAAGTGGCAGGAAATTTGTATTGAAAGCTGTACCTTCTTTTCCTTCATTGTCTCCTTGCGTTAAATCCAAAAGCAATGACGATGAGGATTCTCCCAACAGTTCAGAGCGAGTGACAATTGACTAA 2730 0.4179 MDSPQPSKNNSGSSSASTLNNNNNINDASLSESPQVQESPFLSFVKTLSPIHTKVCHMAQGFQGLSSPPLVFKSPRISHRETQFMERPQGTQSLGGVISQSVNEGNRLGEAREDSRKCYSQQPLPERFIIDTQKVFDPNNDANTQYYSSPLCIDKYLVDPGDIDQMYSANQDVEQQSTDAAETSLSDQTHSEKNILNFDRKDGPGDKAEESLSLSEDSNKVHQEEAAYGEEPENMEGEKNDVEWASQEPANLEAIFHERYSHDPLPQLVDNYQWDHKNGTPQWMPGPLQDVKGCEDYIEMVPTSHVTAENILQDGSEATLKYHGIRRRRLKFGEAASNALGSNIKLNATTNKMKMVNPSELVTSLCPQRGSGNLPLTGPKPPGIGLHLNSIINAIPTGQAAITGVRLSDGSQGMNSTSSIRLQRMENVKRSILSSNVDGQSLLDTRNESHEIDDTIATDAGNSEDFNQPPSPCKKKKKTSVTADDNGCKRCNCKKSKCLKLYCECFTAGIYCTDPCACLGCLNRPEHAETVVEIKQQIESRNPIAFTPKIVQTTTDISSNMVDDTNLTTPSSARHKRGCNCKRSMCLKKYCECYQANVGCSSGCRCEGCKNSYGKKEDYVAFEHTSRKERISSIVEEGSHYTLNNKLEIVACKTVYDLQRLSPITPSLQCSDQGKEAAKSRVISGNYLPSPESDVNKFAYCANYTESSENLHSNHELLETNEMLGSVPCDSQIECNNAIPLQLTPPLPNPEQSSTSSFPSVASEWTNIPQSRLSCGSIRQLPGGSLRWRSSPLTPSTRVVVGEAQYLQRSESDSRLYDILENETPDILKEAALTPMTSVKVNSPTQKRVSPPQSRHLGIVGSSSSGELRSGRKFVLKAVPSFPSLSPCVKSKSNDDEDSPNSSERVTID 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1135 909 MobiDBLite consensus disorder prediction 839 869 - -
Aed6g1135 909 MobiDBLite consensus disorder prediction 460 475 - -
Aed6g1135 909 MobiDBLite consensus disorder prediction 193 236 - -
Aed6g1135 909 MobiDBLite consensus disorder prediction 458 477 - -
Aed6g1135 909 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 1 897 - -
Aed6g1135 909 MobiDBLite consensus disorder prediction 883 909 - -
Aed6g1135 909 MobiDBLite consensus disorder prediction 172 236 - -
Aed6g1135 909 MobiDBLite consensus disorder prediction 1 36 - -
Aed6g1135 909 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 489 524 IPR005172 -
Aed6g1135 909 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 577 612 IPR005172 -
Aed6g1135 909 ProSiteProfiles CRC domain profile. 487 614 IPR005172 -
Aed6g1135 909 MobiDBLite consensus disorder prediction 172 192 - -
Aed6g1135 909 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 897 IPR044522 GO:0003700
Aed6g1135 909 SMART CXC_2 574 615 IPR033467 -
Aed6g1135 909 SMART CXC_2 486 527 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1135 Aed-Chr6 16008402 16015096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1135 382 629 CPP Transcription Factor Family AT3G22760 44.578 1.49e-59 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aed6g1135 TCR 6.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1135 K21776 - gmx:547664 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1135 6 16008402 16015096 Aed6g1135 6 16008402 16015096 ECH
Aed6g1135 6 16008402 16015096 Aed10g0608 10 4868187 4869723 PCT