Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1131 ATGTCATCAAATAGGATAAGTAAGATCAAAATATTTAGAATGTATGGTGACAATGAGGATGATGATGACGGTAATTACAAGAAACAAGCGGATGAGGATGAGAGAGTTATAGAGACAAGAGGTCATGATGGCAGCCAATACAGCCTCACCGGCATTCTTCTTCCCTCTCTCGGTGCCACGGCTACCCGCAATGGTAGCCATAGAGCAAAGCTTCATGGCCATGTTATCTCTCCATATCATCACCGTTACAAACTATGGAACAAGTTTTTGCTGGTATTGGTTTTCTACACTGCTTGGATGTGTCCATTTGAATTTGGTTTCCTTGAGAAATCAAATATTGAAGTGGCTATAATAGACAATGTTGTAAACGGGTTCTTTGCCATCGACATAGTGGTCACCTTCTTCGTTGCCTTCCTTGATAAGTCCACATATTTGCTAGTTGATGACCACAAACTCATTGCTTTGAGATATGCTAAATCCTGGTTGATCTTGGATGTCCTTGCAACCATTCCTTATGAAGTTGTTATTAAAATTTTGCCACCTTCTCTTCAAATATATAATTGGAAAAGAACAGAAAATATAGCTACTTTTGGTTGCGTTGTTGCAAGCTTACATGTTCGAAAATCTTCATGGCTTGGACTTGTTTCTGATGCCACTGACCAGAATATATGGGGAAACTATGTAGTAGCAGTATATTGGGCCATAGCGACCCTTGCATCAGTTGGTTATGGCGATCTACATCCTGTAAATACAAAAGAAATGGTATTTTGCATTTTTTATATGCTCTTCATTCTTGGACTCACCTCATATCTCATAGGCAACATGAGCAACTTGAGAGACACTGTCCATTCTGCCTCAAATTTTGCCAAAAGGAATCACTTGCCAGACCGTTTGCAAGAACAAATGTTTGCTCATTTGCTTATGAAGTACAGAACTGATTTAGAAGGACTACAACAACAAGAAATCATTGATTCTCTTCCAAAAGCCATTCAATCTAGCATCTCACACTACCTATTCTTTTCGATTGTTGACAAAGTGTACTTGTTTCGTGGAGTCACAGAGATGAAGGCCGAGTATTTTCCACCAAAGGAAGATGTTGTTGGTGAGGCAAAGCCAGGAGATGTAGTTGGAGAAATAGGAGTGTTATGTTATAGGCCACAACTATTTACGGTTCGGACCAAGCGATTGAGCCAGATCTTGCGTTTGAATCGAACAACATTTCTAAATCTTACTCATTCCAACATTGGAGATGGAACAATAGTCATGAACAACTTTCTTCAGAATTTACATGAATCAGGGGAACCACTATTGAGAGGAATTTTGGCAGAAACAGAAGCAATGTTGGCCAGGGGCAAAATGGACTTGCCAATTACTTTATTCTTTGCTTCTAGGACATGGGGCTAA 1404 0.3967 MSSNRISKIKIFRMYGDNEDDDDGNYKKQADEDERVIETRGHDGSQYSLTGILLPSLGATATRNGSHRAKLHGHVISPYHHRYKLWNKFLLVLVFYTAWMCPFEFGFLEKSNIEVAIIDNVVNGFFAIDIVVTFFVAFLDKSTYLLVDDHKLIALRYAKSWLILDVLATIPYEVVIKILPPSLQIYNWKRTENIATFGCVVASLHVRKSSWLGLVSDATDQNIWGNYVVAVYWAIATLASVGYGDLHPVNTKEMVFCIFYMLFILGLTSYLIGNMSNLRDTVHSASNFAKRNHLPDRLQEQMFAHLLMKYRTDLEGLQQQEIIDSLPKAIQSSISHYLFFSIVDKVYLFRGVTEMKAEYFPPKEDVVGEAKPGDVVGEIGVLCYRPQLFTVRTKRLSQILRLNRTTFLNLTHSNIGDGTIVMNNFLQNLHESGEPLLRGILAETEAMLARGKMDLPITLFFASRTWG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1131 467 CDD CAP_ED 363 414 IPR000595 -
Aed6g1131 467 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 27 188 - -
Aed6g1131 467 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 195 367 - -
Aed6g1131 467 PANTHER POTASSIUM CHANNEL AKT1 364 463 IPR045319 GO:0005249|GO:0006813
Aed6g1131 467 PANTHER POTASSIUM CHANNEL AKT1 195 367 IPR045319 GO:0005249|GO:0006813
Aed6g1131 467 SUPERFAMILY Voltage-gated potassium channels 78 278 - -
Aed6g1131 467 Pfam Ion transport protein 84 182 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed6g1131 467 ProSiteProfiles cAMP/cGMP binding motif profile. 347 428 IPR000595 -
Aed6g1131 467 Pfam Ion channel 216 276 IPR013099 -
Aed6g1131 467 SUPERFAMILY cAMP-binding domain-like 277 429 IPR018490 -
Aed6g1131 467 Gene3D Jelly Rolls 342 432 IPR014710 -
Aed6g1131 467 PANTHER POTASSIUM CHANNEL AKT1 27 188 IPR045319 GO:0005249|GO:0006813
Aed6g1131 467 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 364 463 - -
Aed6g1131 467 Gene3D - 184 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1131 Aed-Chr6 15909649 15917308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1131 20 463 Ion Channels AT4G32500 47.761 5.40e-160 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1131 K21867 - gmx:100808832 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1131 6 15909649 15917308 Aed6g1131 6 15909649 15917308 ECH
Aed6g1131 6 15909649 15917308 Aed4g1819 4 22410440 22415905 PCT