Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1129 ATGTTATGTTCTATAGGTGGAAGCTTGAGCCCAGTGGAAACATTGGCATCGACTGCTATTTGTGGAATTATTCACTCAATATTTGGTGGTCAACCTTTGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTCTACAAGTTCTGCATAAAAACGCCAGAGCTAGGTGCCAATATGTTTCTGCCTTGGGCTGGTTGGGTTTGTGTGTGGACATCATTCATTCTGATTATGCTTGCAATTTTCAACGCATGCAATGTTATCACAAGGTTCACAAGACTTGCAGAGGAATTATTTGGCATGTTGATTAGTGTCCTTTTCTTTCAAGAGGCTATAAAGGTGAGTTCAACACCTATGGAAATCCTTTGGCAGTGGAAAATCAATTCCAATGGAGGGTCTCTACGAGCTTTCGTTGGAGATTATGGTGTTCCAATGATGTTAGTGATTTGGACTGGATTATCTTATACTCTACCAAAAAATATTCCATCTGCTGTTCCTAGAAGGCTGATATGTCCACTTCCTTGGGAATCTGCTTCTCGCTACCACTGGACAGTACTAAAGGATATGGGAAAGGTACCCTTGGCTTATATCCTTGGGGCATTTATTCCAGCTGTGATGGTAGCAGGTTTATACTTTTTTGATCATAATGTAGCTTCAAAGATGGCTCAACAGAAGGAATTTAACCTTCAAAAACCATCTGCTTTCCACTATGATATGCTCTTACTTGGTATAATGACTCTGATATGCGGTCTCCTTGGCCTTCCTCCAGCAAATGGAGTCCTTCCCCAGGCTCCCATGCATACAAAGAGTTTAGCAGTTCTTAGGAGACAGGTTGATGAGTTGGATAATTTGAAGGAGGCTGTGATGAAATCCAATGGAAAGGATGATGCAAAGGAAAACTTTGATCCTGTTAAACATATAGATGCTTATATACCAGTTCGGGTTAATGAGCAAAGATTGAGTAATTTATTACAGTCTCTTCTGATTGGCCTATCAATTTTTTCTGTTTATATCATCAAAATGATACCTACTTCAGTTCTGTGGGGATATTTTGCATACATGGCAATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGGATATTGCTTCTGTTCGTCTCACCAAGCCGTCGCTACAAAATATTGGAAGGTTCTCATGCCTCATTTGTGGAGTCAGTGCCATTCAAGACCACAGCTTTCTTCACAATCTTACAAATTGTGTATTTTCTAATCTGTTTTGGAGTGACATGGATACCTATTGGAGGAATACTTTTTCCATTACCCTTTTTCCTTCTCATATCTATAAGAGAGCATTTGCTTCCAAAGCTATTCAAATCTGATCATCTTCAAGAACTAGATGCTGCTGAGTATGAGGAAATTGTTGGTGCTCCACATATTTCACATAGTATACCACCAAGGGAAAAAGATCCAAATGATCCTGAGAGTGATGATAAGAATGCAGAAGATTATTATGATGTGGAGATATTGGATGAGATGACAACTCACAGAGGAGAATTGAAGCTCAGAACTGCAAGCCGAAATAGCAGTAGGAGCTTGAGCTTCAGCTACAGCTTCAGTGAAGACAGGGAACATTAG 1605 0.3975 MLCSIGGSLSPVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYKFCIKTPELGANMFLPWAGWVCVWTSFILIMLAIFNACNVITRFTRLAEELFGMLISVLFFQEAIKVSSTPMEILWQWKINSNGGSLRAFVGDYGVPMMLVIWTGLSYTLPKNIPSAVPRRLICPLPWESASRYHWTVLKDMGKVPLAYILGAFIPAVMVAGLYFFDHNVASKMAQQKEFNLQKPSAFHYDMLLLGIMTLICGLLGLPPANGVLPQAPMHTKSLAVLRRQVDELDNLKEAVMKSNGKDDAKENFDPVKHIDAYIPVRVNEQRLSNLLQSLLIGLSIFSVYIIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVSPSRRYKILEGSHASFVESVPFKTTAFFTILQIVYFLICFGVTWIPIGGILFPLPFFLLISIREHLLPKLFKSDHLQELDAAEYEEIVGAPHISHSIPPREKDPNDPESDDKNAEDYYDVEILDEMTTHRGELKLRTASRNSSRSLSFSYSFSEDREH 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1129 534 Coils Coil 274 294 - -
Aed6g1129 534 MobiDBLite consensus disorder prediction 472 487 - -
Aed6g1129 534 PANTHER ANION EXCHANGE PROTEIN 5 116 IPR003020 GO:0005452|GO:0006820|GO:0016020
Aed6g1129 534 Pfam HCO3- transporter family 7 117 IPR011531 GO:0006820|GO:0016021
Aed6g1129 534 Pfam HCO3- transporter family 136 281 IPR011531 GO:0006820|GO:0016021
Aed6g1129 534 Pfam HCO3- transporter family 316 406 IPR011531 GO:0006820|GO:0016021
Aed6g1129 534 PANTHER BORON TRANSPORTER 6-RELATED 5 116 - -
Aed6g1129 534 MobiDBLite consensus disorder prediction 513 534 - -
Aed6g1129 534 PANTHER BORON TRANSPORTER 6-RELATED 282 522 - -
Aed6g1129 534 PANTHER BORON TRANSPORTER 6-RELATED 133 281 - -
Aed6g1129 534 MobiDBLite consensus disorder prediction 469 490 - -
Aed6g1129 534 PANTHER ANION EXCHANGE PROTEIN 282 522 IPR003020 GO:0005452|GO:0006820|GO:0016020
Aed6g1129 534 PANTHER ANION EXCHANGE PROTEIN 133 281 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1129 Aed-Chr6 15899589 15905857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1129 6 515 Antiporters AT5G25430 58.037 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1129 K24194 - gmx:100808880 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1129 6 15899589 15905857 Aed6g1129 6 15899589 15905857 ECH
Aed4g1820 4 22416102 22420343 Aed6g1129 6 15899589 15905857 ECH
Aed6g1129 6 15899589 15905857 Aed4g1820 4 22416102 22420343 PCT