Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1113 ATGGCTCAGCACAACACTGCCAACAACAACAACAACAACAATATTGTCATTATTGTGAGTCAACAACAACAGCAACAGAAAATGTTCCATGACTTTCTTGGCATGAAGAACAACAACCCCAAGACCTCTTCCACCACCGTGTCCCGCGGCGCTGCCACCTCCGCCGACCGTGCTTCCGAAAGACAGGCAAGGAATCATCTTGAGGGAGTTCCATTCTATGGCACAAGGAGTGATTTTTCAAGCATTGAGATAAGCAACAGACTAGTGGGAAACAAGAGAAGCAATTCTGATTCCACTTTTATGGGTTCCTCTAGAGATTCCTTCCAAATGATGCTCCGGAACAGAGCTGGAGCTGGAGCGGATCGCCTTGGAAGGCCTAAAGATGATGAGGTGTTCCTTGGTATGCAGTCACTAAAGCCAGCTAGTGGTTCTCAGATATTGCAGACTGATGCCAATAAATGGGAACAACAATCTATTCTCATGAATGTTGGCCCTTCCATGCAGCATCCACCTCGTGGTGGTCGATTAACGCCTTTTATGGACCAAATAACTTCAAACAGGATGAGGGATCATACCAATGCTGGTCCTTCGTTTGTCTCTCGGTTAGCCGCTGATGAAGGGTCTAGAACCGGAATCAAGGGTGCTGGGATTTTGAGCTCCATAAACACAGTCAATGCAGTCACTGAGAAAACTTCATCTATGCTTGTCGACGCCAGTCAGCATCTGCCAGCTATGACTGTTTTTTATGGAGGTCAAGCTCATGTGTTTGATGATGTCCAGCCTAATAAGGCAGATGTTATAATGGCTTTAGCTGGGTCAAATGGTGGATCTTGGTCCACAGCATTGTCACCCAAATCTTCTGTAAAGCTTCACCATGATAATAACTCGCGAAATGGAGCAAATGAAACAGTTATAGTGAGTAACGTTTCACTCCCTCCGGATCGAAACAGAAGATTGTCTATTACCAGCAGTTCTAGCCATGCCATTAGGCCAGGTGATCAAGCAACTACTCCAACTGGGGCACATCAAGGAAGTATTGTAGCTAAAAATACACCCAGTTCTGAACTTCGTTAA 1074 0.4553 MAQHNTANNNNNNNIVIIVSQQQQQQKMFHDFLGMKNNNPKTSSTTVSRGAATSADRASERQARNHLEGVPFYGTRSDFSSIEISNRLVGNKRSNSDSTFMGSSRDSFQMMLRNRAGAGADRLGRPKDDEVFLGMQSLKPASGSQILQTDANKWEQQSILMNVGPSMQHPPRGGRLTPFMDQITSNRMRDHTNAGPSFVSRLAADEGSRTGIKGAGILSSINTVNAVTEKTSSMLVDASQHLPAMTVFYGGQAHVFDDVQPNKADVIMALAGSNGGSWSTALSPKSSVKLHHDNNSRNGANETVIVSNVSLPPDRNRRLSITSSSSHAIRPGDQATTPTGAHQGSIVAKNTPSSELR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1113 357 ProSiteProfiles Tify domain profile. 238 273 IPR010399 -
Aed6g1113 357 MobiDBLite consensus disorder prediction 36 64 - -
Aed6g1113 357 MobiDBLite consensus disorder prediction 311 357 - -
Aed6g1113 357 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 245 351 IPR040390 -
Aed6g1113 357 PANTHER PROTEIN TIFY 8 245 351 - -
Aed6g1113 357 PANTHER PROTEIN TIFY 8 48 240 - -
Aed6g1113 357 MobiDBLite consensus disorder prediction 36 55 - -
Aed6g1113 357 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 48 240 IPR040390 -
Aed6g1113 357 SMART tify_2 238 273 IPR010399 -
Aed6g1113 357 Pfam tify domain 245 272 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1113 Aed-Chr6 15687944 15692720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1113 1 271 Tify Gene Family AT4G32570 34.951 1.14e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed6g1113 tify 5.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1113 - - gmx:100819293 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1113 6 15687944 15692720 Aed7g2428 7 26151406 26159334 PCT