Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1069 ATGAATACAAAAAGCCTAAGCCCCCAACTCAACCTCTCTTCTTCTCGTCGCGAATCTGCGCTGTACCCGTCCGTCACCGTTCCAACTTCCGATCATCACCGTGCCGTCGCCACCGCAAAAACCAAGCTCAAGAGCCGCGAAACTCAAGGTTTGGTGCCGGTGACGGTGAAGCAGATAAGCGAAGCTTCTCAAACCGGTGATGAAAAGTCGAATTTCGTCATCAACGGTGTAGATCTGAACAACGTAACGCTACTTGGGATGCTGTTTGAGAAAGTTGAGAGAAACACTGATGTCAATTTTGTTTTGGATGATGGAACAGGACGGATCAAATGCCGAAGATGGGTTAATGAGGCTTTTGACACAAAGGAAATGGAGGCAGTAACGAATGGTATTTATGTTCGTGTTTATGGGCATTTGAAAAGCTTTCAAGGTGTTAGGCAACTCGTCGCCTTCTCTGTCAGGCCTGTGACAAATTTTGATGAGATCCCTTTTCACTTTATTGATTGCATACATAACCATCTCCGCTCCAAACTAAAGGTGGAAGGAATCACTTCTGCAAATCCTTCATCTGTCTCATCTTTGAGCACTCCTGTCAAAAGTGCACCAAATGGATCTCAGGCACCATCATCAAATCCTGTATATGCACAATATAGCATGGATGGATTTAAGGATATTGATAAATTGGTTATCGACTACATGAATCAGCATTCAGATTCGTCAGATGAACGTGGAATACATGTTAATGAACTAACCCGAGAGCTGAAGCTTCCATTGGACAAGATCATGTTGTCGCTGCAGACTCTTGCAGGAGAGGGTTTAATATACTCCACCATAGATGACGACCATTACAAAAAAGCTTGA 861 0.439 MNTKSLSPQLNLSSSRRESALYPSVTVPTSDHHRAVATAKTKLKSRETQGLVPVTVKQISEASQTGDEKSNFVINGVDLNNVTLLGMLFEKVERNTDVNFVLDDGTGRIKCRRWVNEAFDTKEMEAVTNGIYVRVYGHLKSFQGVRQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKLKVEGITSANPSSVSSLSTPVKSAPNGSQAPSSNPVYAQYSMDGFKDIDKLVIDYMNQHSDSSDERGIHVNELTRELKLPLDKIMLSLQTLAGEGLIYSTIDDDHYKKA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1069 286 CDD RPA2_DBD_D 81 174 - -
Aed6g1069 286 PANTHER REPLICATION PROTEIN A-RELATED 34 286 IPR040260 -
Aed6g1069 286 Pfam Replication protein A C terminal 191 281 IPR014892 -
Aed6g1069 286 MobiDBLite consensus disorder prediction 186 210 - -
Aed6g1069 286 SUPERFAMILY Nucleic acid-binding proteins 51 175 IPR012340 -
Aed6g1069 286 MobiDBLite consensus disorder prediction 1 21 - -
Aed6g1069 286 Pfam OB-fold nucleic acid binding domain 84 154 IPR004365 GO:0003676
Aed6g1069 286 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 34 286 - -
Aed6g1069 286 Gene3D - 216 286 IPR036388 -
Aed6g1069 286 PIRSF RPA32 12 286 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aed6g1069 286 Gene3D - 47 177 IPR012340 -
Aed6g1069 286 SUPERFAMILY "Winged helix" DNA-binding domain 220 284 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1069 Aed-Chr6 15144897 15148315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1069 34 284 Core DNA Replication Machinery Family AT2G24490 45.349 9.17e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1069 K10739 - gmx:100802512 417.157