Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed6g1065 | ATGGGTGGCATCAGCCTCGAAGAGATCAAAAATGAAAACGTCGATCTGGAACGGATTCCAATAGAGGAAGTGTTCGAGCAGCTGAAATGTTCAAGAGCAGGTCTAACATCAGAGGAAGGGGCCAACAGGCTCCAAGTCTTTGGACCAAACAAATTGGAAGAGAAAAAAGTGGCAACTTTTATAGCAGTATATGCTAACTGGGGCTTTGCAAGAATAAAGGGCATGGGATGGGGTTGGGCTGGTGTAATCTGGTTGTACAGTGTGGTAACCTATATCCCTCTTGACTTACTCAAGTTTGCAATCCGCTATATTCTAAGTGGTAAAGCTTGGGATAATCTCTTGGAGAACAAGAAAGACTATGGAAAAGAAGAGAGGGAAGCTCAATGGGCAGCTGCACAGAGGACACTTCATGGTCTTCAGCCTCCAGAAACTTCCAACCTTTTCAATGACAAGAATAGCTACAGGGAGCTTTCAGAGATTGCAGAACAAGCCAAGAGACGCGCCGAAGTTGCAAGGCTTAGGGAGCTTCATACTCTAAAGGGACACGTTGAGTCAGTGGTGAAGCTGAAGGGGCTTGACATTGACACGATTCAGCAGCATTATACAGTTTAA | 612 | 0.4526 | MGGISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGANRLQVFGPNKLEEKKVATFIAVYANWGFARIKGMGWGWAGVIWLYSVVTYIPLDLLKFAIRYILSGKAWDNLLENKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed6g1065 | 203 | PANTHER | PLASMA MEMBRANE ATPASE | 1 | 56 | - | - | |
| Aed6g1065 | 203 | Coils | Coil | 154 | 174 | - | - | |
| Aed6g1065 | 203 | Gene3D | - | 152 | 203 | - | - | |
| Aed6g1065 | 203 | PANTHER | PLASMA MEMBRANE ATPASE | 57 | 184 | - | - | |
| Aed6g1065 | 203 | Pfam | Cation transporter/ATPase, N-terminus | 19 | 62 | IPR004014 | - | |
| Aed6g1065 | 203 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 14 | 62 | IPR023298 | - | |
| Aed6g1065 | 203 | SMART | Cation_ATPase_N_a_2 | 15 | 64 | IPR004014 | - | |
| Aed6g1065 | 203 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 57 | 184 | - | - | |
| Aed6g1065 | 203 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 56 | - | - | |
| Aed6g1065 | 203 | Gene3D | - | 44 | 104 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed6g1065 | Aed-Chr6 | 15075925 | 15086236 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed6g1065 | 57 | 203 | Primary Pumps ATPases | AT2G24520 | 84.314 | 1.15e-86 | 267 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed6g1065 | K01535 | - | gmx:100791692 | 291.197 |
Event-related genes