Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1051 ATGGCCGTGGATTTCATGGGATTACCCAAACAAGAAGATCAAAAGGCCATCCAAGAGGCCGCATCGGAAGGCCTCAAGGGCATGGAGCACCTGATCCGCACCCTCTCCCACCACCCCTCTCACTTGAACACCGAACTCGCCGACGTTACGGTTTCCAAGTTCAAGAAACTCATCTCTCTCCTCGACCGAACCGGCCACGCCCGGTTCAGACGCGCGCCGGTTCAGCCATCATCTCCTCAACCGGTTCACAACAACAACAACGCGTCCTCCTCGTCAATTCAACTCGCTCTTCCTCTTCCTCCTCCTCCTCCTCAGCCGCCGCAGTTTACGTCTCCGCCGCCGATGACCGTCCACCACGCGCCGCCGCCGGCGAGCGTGACGCTCGATTTCACGAAGCCGCACAACAACGCGCTTCTCAGCTCCAAGGCGGCGAAGTCCGTCGAGCTCGAGTTCTCGAAGGAGACGACTTTCAGCGTCTCCTCCACCTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGGCAGTGTCTCCAACGGGAAGATCTTCCTCGCGCCGCCGCAGCCTCCGGCGACCTCCGCCGGTAAACCGCCGGCGTTCAAGAAGCGCTGCCACGAGCACCGCGACCACTCCGACGACGTCTCCGGCTCCAGCAAATGCCACTGCGTCAAGCGAAGGAAAAATAGGGTGAAGAAGACGGTGAGGGTGCCGGCGATTAGCTCAAAAATTGCCGATATACCACCGGACGAGTACTCGTGGAGGAAGTATGGTCAGAAACCGATCAAGGGGTCACCATACCCGAGTAGTAGTAGTGGGAAGTGGGAAACAATGACTGCTATGTAA 840 0.5905 MAVDFMGLPKQEDQKAIQEAASEGLKGMEHLIRTLSHHPSHLNTELADVTVSKFKKLISLLDRTGHARFRRAPVQPSSPQPVHNNNNASSSSIQLALPLPPPPPQPPQFTSPPPMTVHHAPPPASVTLDFTKPHNNALLSSKAAKSVELEFSKETTFSVSSTSSFMSSAITGDGSVSNGKIFLAPPQPPATSAGKPPAFKKRCHEHRDHSDDVSGSSKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPSSSSGKWETMTAM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1051 279 Pfam Plant zinc cluster domain 200 244 IPR018872 -
Aed6g1051 279 SMART WRKY_cls 246 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1051 279 MobiDBLite consensus disorder prediction 70 119 - -
Aed6g1051 279 SUPERFAMILY WRKY DNA-binding domain 244 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1051 279 ProSiteProfiles WRKY domain profile. 241 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1051 279 MobiDBLite consensus disorder prediction 77 95 - -
Aed6g1051 279 MobiDBLite consensus disorder prediction 254 279 - -
Aed6g1051 279 Pfam WRKY DNA -binding domain 248 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1051 279 PANTHER WRKY PROTEIN 12 266 - -
Aed6g1051 279 Gene3D WRKY domain 225 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1051 279 MobiDBLite consensus disorder prediction 96 119 - -
Aed6g1051 279 MobiDBLite consensus disorder prediction 262 279 - -
Aed6g1051 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 266 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1051 Aed-Chr6 14933025 14935580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1051 1 266 WRKY Transcription Factor Family AT4G31550 58.865 5.17e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g1051 Plant_zn_clust 1.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1051 - - gmx:100127381 329.717