Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1050 ATGCACAAATGCAAATGGAAGTATGGTCATGAATTTCATGGGGTTACCAAAACAAGACAATTAAGAGATCATCCAAGAGGCCGCATCGGAAGGCCTGAAAGGCATGGAGCACCTGATCTGCACCCCTCCCGTCAGTCCTCTTACCTGAACACCAACTTCCCTGGTGTTACGATTGCCAAGTTCAAGAAACTTAGTTCTCTTTTGACCCGAATCGACCATGCCCAATTCAGATATGCCCCAATTCAACCATCCTCATCTGTTCACTCACCCAATTTGGTTCACAATAATGTGTCTGCCTCATCAATTCAACTCCCTCCTCATTTTCCTTCACCATCACAGAACCCTAACATTTTCATGATGCCGCAATTACCTTCTTCGTCGCTGATGCCCATTCACCACGTGTCGCTGACCAGCATGATACTCGATTTCATGAAGCCACACAACACACTTATGAGTTCCATGGCGAAATTCATTGAGTTCAAGATCTTGAAGAAGACCTTCAACGTCTCCTCCAACTCCTCCTTCATGTCCTCTGCCATCACCGGTAATAGCAGCATCTCCAACGAGAAGATCTTCCTCCCTCCATGGCCACCACTGACAGCCACCTTCGTCGAAAAATTGACAATGTTCAAGAAGCGGTGCCTCGAACACTATGACCACTCCAACTGCATCTCTAGCTCCAACAAGTGCCATTCTATTAATCAAAGGAATAATAAGATAAGGCAAACAATGAGGGTACCGATGATTAGCTCAAAAATCGACGATATTCCACCGGACAAGTACTCGTGGAGGAAGTATGGTCAGAAAGTGATCAAGGGGTCACCATACCCAAGGTAA 837 0.4588 MHKCKWKYGHEFHGVTKTRQLRDHPRGRIGRPERHGAPDLHPSRQSSYLNTNFPGVTIAKFKKLSSLLTRIDHAQFRYAPIQPSSSVHSPNLVHNNVSASSIQLPPHFPSPSQNPNIFMMPQLPSSSLMPIHHVSLTSMILDFMKPHNTLMSSMAKFIEFKILKKTFNVSSNSSFMSSAITGNSSISNEKIFLPPWPPLTATFVEKLTMFKKRCLEHYDHSNCISSSNKCHSINQRNNKIRQTMRVPMISSKIDDIPPDKYSWRKYGQKVIKGSPYPR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1050 278 Gene3D WRKY domain 244 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1050 278 MobiDBLite consensus disorder prediction 18 40 - -
Aed6g1050 278 MobiDBLite consensus disorder prediction 18 46 - -
Aed6g1050 278 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 43 278 IPR044810 GO:0003700
Aed6g1050 278 Pfam WRKY DNA -binding domain 259 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1050 278 ProSiteProfiles WRKY domain profile. 252 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1050 278 SUPERFAMILY WRKY DNA-binding domain 255 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1050 278 Pfam Plant zinc cluster domain 211 255 IPR018872 -
Aed6g1050 278 PANTHER WRKY PROTEIN 43 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1050 Aed-Chr6 14924936 14926967 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1050 42 278 WRKY Transcription Factor Family AT4G31550 40.486 3.47e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g1050 Plant_zn_clust 5.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1050 - - gmx:100791219 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1050 6 14924936 14926967 Aed6g1050 6 14924936 14926967 ECH
Aed2g0367 2 2515236 2516623 Aed6g1050 6 14924936 14926967 ECH