Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1049 ATGGACGAGTACTTGTGGAGAAAGTACGGCCAGAAACCGATCAAGGGGTCACCATATCCAAGGAGTTACTACAAGTGCAGCACGATGATAGGTTGCCTAGCAAGGAAGCATGTGGAGCGAGCCTTAGATGATCCTGCAATGTTGAAAGTGACATACAAGGGGGAGCACAAGCACGTGGTTTAG 183 0.4918 MDEYLWRKYGQKPIKGSPYPRSYYKCSTMIGCLARKHVERALDDPAMLKVTYKGEHKHVV 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1049 60 ProSiteProfiles WRKY domain profile. 1 60 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1049 60 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 58 IPR044810 GO:0003700
Aed6g1049 60 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 58 - -
Aed6g1049 60 Pfam WRKY DNA -binding domain 2 58 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1049 60 SMART WRKY_cls 2 60 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g1049 60 Gene3D WRKY domain 1 60 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g1049 60 SUPERFAMILY WRKY DNA-binding domain 2 58 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1049 Aed-Chr6 14905854 14906131 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1049 2 58 WRKY Transcription Factor Family AT2G24570 80.702 1.90e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g1049 WRKY 9.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1049 - - pvy:116134876 112.079